RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 CIITAP33076 1130 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 CLCN1P35523 988 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 TPM4P67936 248 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 Q4G0T1 1027 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 SMYD4Q8IYR2 804 aaPredicted RBP15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 KLRG1Q96E93 195 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 HOOK2Q96ED9 719 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 MAGEF1Q9HAY2 307 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 BLOC1S4Q9NUP1 217 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 MRPL11Q9Y3B7 192 aaKnown RBP15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 PPP2R3BQ9Y5P8 575 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 FAM86B1E9PN63 330 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 CYP3A4P08684 503 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 FAM86B2P0C5J1 330 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 PTPRAP18433 802 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 FANCCQ00597 558 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 SPP2Q13103 211 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 MTMR2Q13614 643 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 CCDC144BQ3MJ40 725 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 CCDC186Q7Z3E2 898 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 TRMT44Q8IYL2 757 aaKnown RBP15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 ETNPPLQ8TBG4 499 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 CALML4Q96GE6 196 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 AGBL1Q96MI9 1066 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 RAB34Q9BZG1 259 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 IFNKQ9P0W0 207 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 PCDHA12Q9UN75 941 aa15.5■□□□□ 0.07
SNRNP27-201ENST00000244227 DOCK1Q14185 1865 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 ABCB11O95342 1321 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 GOLGA6L6A8MZA4 724 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 CFBP00751 764 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 ICAM1P05362 532 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 ZNF18P17022 549 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 VCAM1P19320 739 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 PTGS1P23219 599 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 MSNP26038 577 aaKnown RBP15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 ECM1Q16610 540 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 DRC7Q8IY82 874 aa15.49■□□□□ 0.07
SNRNP27-201ENST00000244227 PITPNM2Q9BZ72 1349 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 GCOM1H8Y6P7 765 aaPredicted RBP15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 TPM3P06753 285 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 POLR2MP0CAP2 368 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 BACE1P56817 501 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 KCNB1Q14721 858 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 TMEM119Q4V9L6 283 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 ZNF658Q5TYW1 1059 aaPredicted RBP15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 FCHSD1Q86WN1 690 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 UIMC1Q96RL1 719 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 C7orf25Q9BPX7 421 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 RMND1Q9NWS8 449 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
SNRNP27-201ENST00000244227 TBX3O15119 743 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 ZNF500O60304 480 aaPredicted RBP15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 USP14P54578 494 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 SPIRE1Q08AE8 756 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 KMT5BQ4FZB7 885 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 PRR16Q569H4 304 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 HYIQ5T013 277 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 KRT79Q5XKE5 535 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 ZNF280CQ8ND82 737 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 SNX29Q8TEQ0 813 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 TRIM9Q9C026 710 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 ADARB2Q9NS39 739 aaKnown RBP15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 IGLV3-22A0A075B6J6 115 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 MARCH6O60337 910 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 RHOBTB3O94955 611 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 SPATA1Q5VX52 437 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 C9orf131Q5VYM1 1079 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 DLK2Q6UY11 383 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 CLEC4DQ8WXI8 215 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 AS3MTQ9HBK9 375 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 PICK1Q9NRD5 415 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 SAMSN1Q9NSI8 373 aaKnown RBP15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 CCPG1Q9ULG6 757 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
SNRNP27-201ENST00000244227 USP2O75604 605 aaPredicted RBP15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 HSD17B4P51659 736 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 STX17P56962 302 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 SEMA3FQ13275 785 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 SUPT20HL1Q3ZLR7 823 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 NOL9Q5SY16 702 aaKnown RBP15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 KLHL10Q6JEL2 608 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 RAD54LQ92698 747 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 C12orf42Q96LP6 360 aa15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 NAP1L5Q96NT1 182 aaPredicted RBP15.46■□□□□ 0.07
SNRNP27-201ENST00000244227 TANGO6Q9C0B7 1094 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms