RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SH2D3CQ8N5H7 860 aa22.07■■□□□ 1.12
HOXC13-201ENST00000243056 C3orf20Q8ND61 904 aa22.07■■□□□ 1.12
HOXC13-201ENST00000243056 AENQ8WTP8 325 aaKnown RBP22.07■■□□□ 1.12
HOXC13-201ENST00000243056 GPR75-ASB3A0A0A6YYF3 556 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 LSP1P33241 339 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 PLCD1P51178 756 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 RBL2Q08999 1139 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 STRIP1Q5VSL9 837 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 MFSD6Q6ZSS7 791 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 TRAPPC11Q7Z392 1133 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 CPLX3Q8WVH0 158 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 RSRC1Q96IZ7 334 aaKnown RBP22.06■■□□□ 1.12
HOXC13-201ENST00000243056 EPN3Q9H201 632 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 PSMD14O00487 310 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 BAG3O95817 575 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 RASSF8Q8NHQ8 419 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 PSMD1Q99460 953 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 HINFPQ9BQA5 517 aa22.06■■□□□ 1.12
HOXC13-201ENST00000243056 OTUD7BQ6GQQ9 843 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 C6orf89Q6UWU4 347 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 YEATS4O95619 227 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 POLR3DP05423 398 aaPredicted RBP22.05■■□□□ 1.12
HOXC13-201ENST00000243056 LDHCP07864 332 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 SLC8A1P32418 973 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 FMR1Q06787 632 aaKnown RBP eCLIP22.05■■□□□ 1.12
HOXC13-201ENST00000243056 THEMIS2Q5TEJ8 643 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 SND1Q7KZF4 910 aaKnown RBP eCLIP22.05■■□□□ 1.12
HOXC13-201ENST00000243056 SUPT20HQ8NEM7 779 aa22.05■■□□□ 1.12
HOXC13-201ENST00000243056 NAA15Q9BXJ9 866 aaKnown RBP22.05■■□□□ 1.12
HOXC13-201ENST00000243056 DDX4Q9NQI0 724 aaKnown RBP22.05■■□□□ 1.12
HOXC13-201ENST00000243056 CMA1P23946 247 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 GUCY1A3Q02108 690 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 MYL10Q9BUA6 226 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 SCAF8Q9UPN6 1271 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 NFE2L3Q9Y4A8 694 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 TEX33O43247 280 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 SRGAP2O75044 1071 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 EPB41P11171 864 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 IARSP41252 1262 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 SEC24CP53992 1094 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 NFIAQ12857 509 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 DRP2Q13474 957 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 NR1I3Q14994 352 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 FAM47AQ5JRC9 791 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 APOBEC3HQ6NTF7 200 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 BZW1Q7L1Q6 419 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 FOXP4Q8IVH2 680 aaPredicted RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 HOOK2Q96ED9 719 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 RNPC3Q96LT9 517 aaKnown RBP22.04■■□□□ 1.12
HOXC13-201ENST00000243056 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 BATF3Q9NR55 127 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 POLR3EQ9NVU0 708 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 TAOK2Q9UL54 1235 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 FAM184BQ9ULE4 1060 aa22.04■■□□□ 1.12
HOXC13-201ENST00000243056 TULP1O00294 542 aaPredicted RBP22.03■■□□□ 1.12
HOXC13-201ENST00000243056 DNM1LO00429 736 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 ENC1O14682 589 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 NMT2O60551 498 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 CRKP46108 304 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 PPP4CP60510 307 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 LONRF3Q496Y0 759 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 KIAA1328Q86T90 577 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 TRMT44Q8IYL2 757 aaKnown RBP22.03■■□□□ 1.12
HOXC13-201ENST00000243056 GAKO14976 1311 aa22.03■■□□□ 1.12
HOXC13-201ENST00000243056 HMGB1P09429 215 aaKnown RBP22.02■■□□□ 1.12
HOXC13-201ENST00000243056 SYKP43405 635 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
HOXC13-201ENST00000243056 ZFPM1Q8IX07 1006 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 MYCBPAPQ8TBZ2 947 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 ACTR5Q9H9F9 607 aaPredicted RBP22.02■■□□□ 1.12
HOXC13-201ENST00000243056 HOMER3Q9NSC5 361 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 ATP8A2Q9NTI2 1148 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 USP40Q9NVE5 1235 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 GOLGA6L7A0A1B0GV03 622 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 OPA1O60313 960 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 RANBP6O60518 1105 aaKnown RBP22.02■■□□□ 1.12
HOXC13-201ENST00000243056 TCP10Q12799 353 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 PTGISQ16647 500 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 MYSM1Q5VVJ2 828 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 CAPRIN2Q6IMN6 1127 aaKnown RBP22.02■■□□□ 1.12
HOXC13-201ENST00000243056 CAPZA3Q96KX2 299 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 CCT8L2Q96SF2 557 aa22.02■■□□□ 1.12
HOXC13-201ENST00000243056 A6NNZ2 444 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 CDC25CP30307 473 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 TUBB8Q3ZCM7 444 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 KCTD16Q68DU8 428 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 CDC42EP5Q6NZY7 148 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 MIS18BP1Q6P0N0 1132 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 NLRP14Q86W24 1093 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 DRAXINQ8NBI3 349 aaPredicted RBP22.01■■□□□ 1.11
HOXC13-201ENST00000243056 TSEN2Q8NCE0 465 aaKnown RBP22.01■■□□□ 1.11
HOXC13-201ENST00000243056 NSMCE1Q8WV22 266 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 TEKT1Q969V4 418 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 MYO1AQ9UBC5 1043 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 HOOK1Q9UJC3 728 aaKnown RBP22.01■■□□□ 1.11
HOXC13-201ENST00000243056 STAMBPL1Q96FJ0 436 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 FAM163AQ96GL9 167 aaPredicted RBP22.01■■□□□ 1.11
HOXC13-201ENST00000243056 TRIM10Q9UDY6 481 aa22.01■■□□□ 1.11
HOXC13-201ENST00000243056 TRPC6Q9Y210 931 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms