RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 LAMB1P07942 1786 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 TXKP42681 527 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 LRRC41Q15345 812 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 C12orf60Q5U649 245 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 BUB1O43683 1085 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 TUBBP07437 444 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 SPA17Q15506 151 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 MAPKAPK5Q8IW41 473 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 GJA10Q969M2 543 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 PURBQ96QR8 312 aaKnown RBP17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 VIPAS39Q9H9C1 493 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 GNPATO15228 680 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 KIF11P52732 1056 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 PPARDQ03181 441 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 MS4A14Q96JA4 679 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 KANSL2Q9H9L4 492 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 SNX12Q9UMY4 172 aa17.1■□□□□ 0.33
PCDHB8-201ENST00000239444 GOLGA6BA6NDN3 693 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 LRRC53A6NM62 1247 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 APBA1Q02410 837 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 EHBP1Q8NDI1 1231 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 TARSL2A2RTX5 802 aaKnown RBP17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 GFPT1Q06210 699 aaPredicted RBP17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 TSEN2Q8NCE0 465 aaKnown RBP17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
PCDHB8-201ENST00000239444 AKR1B10O60218 316 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 TM4SF1P30408 202 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 SPATA4Q8NEY3 305 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 TBCKQ8TEA7 893 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 NUP58Q9BVL2 599 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 SH2D4AQ9H788 454 aa17.08■□□□□ 0.33
PCDHB8-201ENST00000239444 GOLGA6CA6NDK9 693 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 ZSCAN5CA6NGD5 496 aaPredicted RBP17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 POTEMA6NI47 508 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 MYMKA6NI61 221 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 GOLGA6DP0CG33 693 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 AENQ8WTP8 325 aaKnown RBP17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 OSBPL9Q96SU4 736 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 GOLGA6AQ9NYA3 693 aa17.08■□□□□ 0.32
PCDHB8-201ENST00000239444 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ESYT3A0FGR9 886 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 NDST4Q9H3R1 872 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 MKRN1Q9UHC7 482 aaKnown RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 SIK3Q9Y2K2 1263 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 CCT5P48643 541 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 RNASE9P60153 205 aaKnown RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 RASSF7Q02833 373 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
PCDHB8-201ENST00000239444 PPFIA4O75335 1185 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 TACC1O75410 805 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 NONOQ15233 471 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 VWA3BQ502W6 1294 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 NOC3LQ8WTT2 800 aaKnown RBP17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 ARL8AQ96BM9 186 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 PIGSQ96S52 555 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 C7orf25Q9BPX7 421 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 CCDC88AQ3V6T2 1871 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 PALM3A6NDB9 673 aaPredicted RBP17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 MCM3P25205 808 aa17.06■□□□□ 0.32
PCDHB8-201ENST00000239444 SLC1A4P43007 532 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 769 ms