RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 SDR42E1Q8WUS8 393 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 RNF146Q9NTX7 359 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 NYAP2Q9P242 653 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 RWDD3Q9Y3V2 267 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
NDUFB3-201ENST00000237889 LOC730098B7Z3J9 87 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 NDUFB10O96000 172 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 CYP2D6P10635 497 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 HTRA4P83105 476 aaPredicted RBP11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 PUM1Q14671 1186 aaKnown RBP eCLIP11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 C12orf60Q5U649 245 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 RPAP2Q8IXW5 612 aaPredicted RBP11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 TRERF1Q96PN7 1200 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
NDUFB3-201ENST00000237889 MED19A0JLT2 244 aaPredicted RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 A6NJR5 290 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 B4DLN1 442 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 NBNO60934 754 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 LGR5O75473 907 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 EYA4O95677 639 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 CKBP12277 381 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 IKQ13123 557 aaPredicted RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 DIEXFQ68CQ4 756 aaKnown RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 SESTD1Q86VW0 696 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 ASIC4Q96FT7 647 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 ALG13Q9NP73 1137 aaKnown RBP11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
NDUFB3-201ENST00000237889 TRIOO75962 3097 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 ZNFX1Q9P2E3 1918 aaKnown RBP11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 E9PSI1 815 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 ALAS1P13196 640 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 PTGS1P23219 599 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 ICAM3P32942 547 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 DLX2Q07687 328 aaPredicted RBP11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 RBL2Q08999 1139 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 HYAL1Q12794 435 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 C7orf31Q8N865 590 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 PHF7Q9BWX1 381 aaPredicted RBP11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 CLIP2Q9UDT6 1046 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 TECTAO75443 2155 aa11.51□□□□□ -0.57
NDUFB3-201ENST00000237889 SURF6O75683 361 aaKnown RBP11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 PDE6AP16499 860 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 STAT2P52630 851 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 PDE4BQ07343 736 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 ADAM15Q13444 863 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 GPNMBQ14956 572 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 TMEM63BQ5T3F8 832 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.5□□□□□ -0.575e-7■■□□□ 14
NDUFB3-201ENST00000237889 FRMD5Q7Z6J6 570 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 FAM160B2Q86V87 743 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 SCFD2Q8WU76 684 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 TOP1MTQ969P6 601 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 CCDC8Q9H0W5 538 aaPredicted RBP11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 SEMA4AQ9H3S1 761 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 CYP39A1Q9NYL5 469 aa11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 DBNLQ9UJU6 430 aaKnown RBP11.5□□□□□ -0.57
NDUFB3-201ENST00000237889 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 EPG5Q9HCE0 2579 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 UPP2O95045 317 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 BMP3P12645 472 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 CTNNB1P35222 781 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 PDE4DQ08499 809 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 COASYQ13057 564 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 PTK7Q13308 1070 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 GDF6Q6KF10 455 aaPredicted RBP11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 SEPT8Q92599 483 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
NDUFB3-201ENST00000237889 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 C5orf67F2Z3F1 127 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 TBX10O75333 385 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms