RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 CTNND2Q9UQB3 1225 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 GDAQ9Y2T3 454 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
ITGA4-201ENST00000233573 PRCPP42785 496 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 PNMA5Q96PV4 448 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 C7orf25Q9BPX7 421 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 TRIM9Q9C026 710 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 GGA3Q9NZ52 723 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
ITGA4-201ENST00000233573 DDX25Q9UHL0 483 aaKnown RBP17.96■□□□□ 0.47
ITGA4-201ENST00000233573 DNTTIP2Q5QJE6 756 aaKnown RBP17.95■□□□□ 0.46
ITGA4-201ENST00000233573 C9orf131Q5VYM1 1079 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 ADSSL1Q8N142 457 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 ANO3Q9BYT9 981 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 ARHGEF10LQ9HCE6 1279 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 CYP3A7-CYP3A51PA0A087WV96 503 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 CYP3A7P24462 503 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 USP11P51784 963 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 PAK1Q13153 545 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 AP3B2Q13367 1082 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 TMEM266Q2M3C6 531 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 FBXO11Q86XK2 927 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 TMX1Q9H3N1 280 aa17.95■□□□□ 0.46
ITGA4-201ENST00000233573 POTEMA6NI47 508 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 OPLAHO14841 1288 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 KCNJ6P48051 423 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
ITGA4-201ENST00000233573 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
ITGA4-201ENST00000233573 NELFBQ8WX92 580 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
ITGA4-201ENST00000233573 PRR12Q9ULL5 1215 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 TAL1P17542 331 aaPredicted RBP17.94■□□□□ 0.46
ITGA4-201ENST00000233573 NUDT12Q9BQG2 462 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 STK17AQ9UEE5 414 aa17.94■□□□□ 0.46
ITGA4-201ENST00000233573 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
ITGA4-201ENST00000233573 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
ITGA4-201ENST00000233573 SMCHD1A6NHR9 2005 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 LRRC10BA6NIK2 292 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 PBX1P40424 430 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 TMEM119Q4V9L6 283 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 MOXD1Q6UVY6 613 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 DLK2Q6UY11 383 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 KCNMB3Q9NPA1 279 aa17.93■□□□□ 0.46
ITGA4-201ENST00000233573 COBLO75128 1261 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 TPM2P07951 284 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 ASNSP08243 561 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 INPP5BP32019 993 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 SPECC1LQ69YQ0 1117 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 MCTP2Q6DN12 878 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
ITGA4-201ENST00000233573 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 GOPCQ9HD26 462 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 STAT2P52630 851 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 DGKZQ13574 1117 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
ITGA4-201ENST00000233573 APOBEC3FQ8IUX4 373 aaKnown RBP17.92■□□□□ 0.46
ITGA4-201ENST00000233573 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
ITGA4-201ENST00000233573 MAPK8IP1Q9UQF2 711 aa17.92■□□□□ 0.46
ITGA4-201ENST00000233573 TEX33O43247 280 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 USH1GQ495M9 461 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 TMEM139Q8IV31 216 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 GJA10Q969M2 543 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 CTAGE1Q96RT6 745 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 ZNF341Q9BYN7 854 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 PIK3CDO00329 1044 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 PLA2G6O60733 806 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
ITGA4-201ENST00000233573 ARHGAP4P98171 946 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 AMPD3Q01432 767 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 HYIQ5T013 277 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 CNNM4Q6P4Q7 775 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 IRF2BP1Q8IU81 584 aa17.91■□□□□ 0.46
ITGA4-201ENST00000233573 LARP4BQ92615 738 aaKnown RBP17.91■□□□□ 0.46
ITGA4-201ENST00000233573 C16orf45Q96MC5 204 aaPredicted RBP17.91■□□□□ 0.46
ITGA4-201ENST00000233573 SSC5DA1L4H1 1573 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 FOSP01100 380 aaPredicted RBP17.9■□□□□ 0.46
ITGA4-201ENST00000233573 SREBF1P36956 1147 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 GOLGA8FQ08AF8 430 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 GOLGA8DPQ0D2H9 430 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 ECM1Q16610 540 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 COBLL1Q53SF7 1204 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 KRT79Q5XKE5 535 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 SV2BQ7L1I2 683 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 KCNK18Q7Z418 384 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 TC2NQ8N9U0 490 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 CCDC112Q8NEF3 446 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 RAD54LQ92698 747 aa17.9■□□□□ 0.46
ITGA4-201ENST00000233573 PCDHA12Q9UN75 941 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms