RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 MSCO60682 206 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 RXRAP19793 462 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 EVCP57679 992 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
SF3B6-201ENST00000233468 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 NPLOC4Q8TAT6 608 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 ZNF274Q96GC6 653 aaPredicted RBP13.03□□□□□ -0.32
SF3B6-201ENST00000233468 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 CYP39A1Q9NYL5 469 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 SYNGAP1Q96PV0 1343 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
SF3B6-201ENST00000233468 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
SF3B6-201ENST00000233468 hCG_1984214I3L0E3 225 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 CYTH3O43739 400 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 BAATQ14032 418 aaPredicted RBP13.02□□□□□ -0.33
SF3B6-201ENST00000233468 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
SF3B6-201ENST00000233468 MUM1L1Q5H9M0 696 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 MAMDC4Q6UXC1 1216 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 SRBD1Q8N5C6 995 aaKnown RBP13.02□□□□□ -0.33
SF3B6-201ENST00000233468 ZNF713Q8N859 430 aaPredicted RBP13.02□□□□□ -0.33
SF3B6-201ENST00000233468 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
SF3B6-201ENST00000233468 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
SF3B6-201ENST00000233468 NFIBO00712 420 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 CPLX1O14810 134 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 CDKL5O76039 1030 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 CALML3P27482 149 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 PDIA3P30101 505 aaKnown RBP13.01□□□□□ -0.33
SF3B6-201ENST00000233468 NEK4P51957 841 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 RPS6P62753 249 aaKnown RBP13.01□□□□□ -0.33
SF3B6-201ENST00000233468 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
SF3B6-201ENST00000233468 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 FAM133AQ8N9E0 248 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 TRPV1Q8NER1 839 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 CUL5Q93034 780 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
SF3B6-201ENST00000233468 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
SF3B6-201ENST00000233468 NID2Q14112 1375 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 GCOM1H8Y6P7 765 aaPredicted RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 DLL1O00548 723 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 POLR2MP0CAP2 368 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 CNGA1P29973 690 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 CYP2C19P33261 490 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 TOB2Q14106 344 aaPredicted RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 TDHQ8IZJ6 230 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 SLKQ9H2G2 1235 aaPredicted RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
SF3B6-201ENST00000233468 BOLA1Q9Y3E2 137 aa13□□□□□ -0.33
SF3B6-201ENST00000233468 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 SEPT4O43236 478 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 CFBP00751 764 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 IGHA2P01877 340 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 RABEP1Q15276 862 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 ANO1Q5XXA6 986 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 PPP1R18Q6NYC8 613 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 HEATR3Q7Z4Q2 680 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 IWS1Q96ST2 819 aa12.99□□□□□ -0.33
SF3B6-201ENST00000233468 SENP6Q9GZR1 1112 aaPredicted RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 V9GY48 417 aaPredicted RBP12.99□□□□□ -0.33
SF3B6-201ENST00000233468 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 LTBP2Q14767 1821 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
SF3B6-201ENST00000233468 ST18O60284 1047 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
SF3B6-201ENST00000233468 CYBAP13498 195 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 AKR1A1P14550 325 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 IFNAR1P17181 557 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 CDC27P30260 824 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 ALDH5A1P51649 535 aaPredicted RBP12.98□□□□□ -0.33
SF3B6-201ENST00000233468 AK2P54819 239 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 CNTN2Q02246 1040 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 GHRHRQ02643 423 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 PDE4DQ08499 809 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 SLC35G1Q2M3R5 365 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
SF3B6-201ENST00000233468 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
SF3B6-201ENST00000233468 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 MTMR10Q9NXD2 777 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 DDX20Q9UHI6 824 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms