RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 DCDC2CA8MYV0 355 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 CXCR5P32302 372 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 PEX5P50542 639 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 MFSD4BQ5TF39 518 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 FAM136AQ96C01 138 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 KLHL29Q96CT2 875 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 IWS1Q96ST2 819 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 RAB17Q9H0T7 212 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 ATP8A2Q9NTI2 1148 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 CAPN11Q9UMQ6 739 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 MYH10P35580 1976 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 FOXO3O43524 673 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 PRC1O43663 620 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 POLD1P28340 1107 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 TEFQ10587 303 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 TSR1Q2NL82 804 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 DDX46Q7L014 1031 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 ASRGL1Q7L266 308 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 MAGOHBQ96A72 148 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 TAB2Q9NYJ8 693 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 BCL9LQ86UU0 1499 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 MED1Q15648 1581 aaPredicted RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 GJA8P48165 433 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 BPIFB4P59827 614 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 BNIP1Q12981 228 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 TRADDQ15628 312 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 IRGCQ6NXR0 463 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 TMTC2Q8N394 836 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 GBP7Q8N8V2 638 aaPredicted RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 NCSTNQ92542 709 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 STK38LQ9Y2H1 464 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 WDR37Q9Y2I8 494 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 BCL9O00512 1426 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 CHGBP05060 677 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 CALB2P22676 271 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 GSTT1P30711 240 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 GBP1P32455 592 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 COPS2P61201 443 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 SPAG1Q07617 926 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 KIF2BQ8N4N8 673 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 LZICQ8WZA0 190 aa14.3□□□□□ -0.12
MSH2-201ENST00000233146 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
MSH2-201ENST00000233146 USO1O60763 962 aaKnown RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 EIF1ADQ8N9N8 165 aaKnown RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 SMYD1Q8NB12 490 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 PROCA1Q8NCQ7 364 aaPredicted RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 MDM1Q8TC05 714 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 DYDC1Q8WWB3 177 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 PBKQ96KB5 322 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 MYO5AQ9Y4I1 1855 aaKnown RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 UBXN1Q04323 297 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 GRIN1Q05586 938 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 LONP2Q86WA8 852 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 FBF1Q8TES7 1133 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 VCX3BQ9H321 246 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
MSH2-201ENST00000233146 RNPEPL1Q9HAU8 725 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 VCX3AQ9NNX9 186 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 SAMD15Q9P1V8 674 aa14.29□□□□□ -0.12
MSH2-201ENST00000233146 CTNNA1P35221 906 aaKnown RBP14.28□□□□□ -0.12
MSH2-201ENST00000233146 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 PTPRN2Q92932 1015 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 PSMB7Q99436 277 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 ELAC2Q9BQ52 826 aaKnown RBP14.28□□□□□ -0.12
MSH2-201ENST00000233146 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 MYH7BA7E2Y1 1941 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
MSH2-201ENST00000233146 E2F6O75461 281 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 CCDC166P0CW27 439 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 PTPREP23469 700 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 DPYDQ12882 1025 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 LRRC34Q8IZ02 419 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
MSH2-201ENST00000233146 SLC4A7Q9Y6M7 1214 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 RAD23BP54727 409 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 CYP27A1Q02318 531 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 CFAP221Q4G0U5 840 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 KRT40Q6A162 431 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
MSH2-201ENST00000233146 NEO1Q92859 1461 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 KRT23Q9C075 422 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 TUBGCP4Q9UGJ1 667 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 SCOCQ9UIL1 159 aa14.28□□□□□ -0.12
MSH2-201ENST00000233146 TMCC1O94876 653 aa14.27□□□□□ -0.12
MSH2-201ENST00000233146 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms