RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 PHLPP2Q6ZVD8 1323 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 BICDL2A1A5D9 508 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 KCNJ18B7U540 433 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 USP17L10C9JJH3 530 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 PPP1R11O60927 126 aaPredicted RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 SLC1A4P43007 532 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 ETF1P62495 437 aaKnown RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 KCNJ12Q14500 433 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 GMCL1Q96IK5 515 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 MMTAG2Q9BU76 263 aaKnown RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 PSTPIP2Q9H939 334 aa18.9■□□□□ 0.62
GAPDH-201ENST00000229239 ADARB2Q9NS39 739 aaKnown RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
GAPDH-201ENST00000229239 SCN9AQ15858 1988 aa18.89■□□□□ 0.62
GAPDH-201ENST00000229239 N4BP3O15049 544 aa18.89■□□□□ 0.61
GAPDH-201ENST00000229239 TEX33O43247 280 aa18.89■□□□□ 0.61
GAPDH-201ENST00000229239 COPB1P53618 953 aaKnown RBP18.89■□□□□ 0.61
GAPDH-201ENST00000229239 TCP10Q12799 353 aa18.89■□□□□ 0.61
GAPDH-201ENST00000229239 CNNM4Q6P4Q7 775 aa18.89■□□□□ 0.61
GAPDH-201ENST00000229239 EXOC1Q9NV70 894 aa18.89■□□□□ 0.61
GAPDH-201ENST00000229239 TXKP42681 527 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 TNNI2P48788 182 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 HTRA3P83110 453 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 ICA1Q05084 483 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 KCTD1Q719H9 257 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 SV2BQ7L1I2 683 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 REXO1L1PQ8IX06 675 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 ANKRD7Q92527 254 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 L2HGDHQ9H9P8 463 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 PPP2R2CQ9Y2T4 447 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 FECHP22830 423 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 ADKP55263 362 aaKnown RBP18.88■□□□□ 0.61
GAPDH-201ENST00000229239 TRAF1Q13077 416 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 AP3B2Q13367 1082 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 KRT79Q5XKE5 535 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 FAM114A1Q8IWE2 563 aa18.88■□□□□ 0.61
GAPDH-201ENST00000229239 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
GAPDH-201ENST00000229239 CNOT7Q9UIV1 285 aaKnown RBP18.88■□□□□ 0.61
GAPDH-201ENST00000229239 SLC37A4O43826 429 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 EDIL3O43854 480 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 MFAP3LO75121 409 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 TDP2O95551 362 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 SLC16A2P36021 539 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 USP11P51784 963 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 CACNB3P54284 484 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 QRICH1Q2TAL8 776 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 MAP1SQ66K74 1059 aaPredicted RBP18.87■□□□□ 0.61
GAPDH-201ENST00000229239 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 ERO1AQ96HE7 468 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 CDK5RAP3Q96JB5 506 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 TMOD2Q9NZR1 351 aa18.87■□□□□ 0.61
GAPDH-201ENST00000229239 MAGEC2Q9UBF1 373 aaPredicted RBP18.87■□□□□ 0.61
GAPDH-201ENST00000229239 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
GAPDH-201ENST00000229239 HERC5Q9UII4 1024 aaKnown RBP18.87■□□□□ 0.61
GAPDH-201ENST00000229239 VIL1P09327 827 aaKnown RBP18.86■□□□□ 0.61
GAPDH-201ENST00000229239 CCNE1P24864 410 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 RPS12P25398 132 aaKnown RBP18.86■□□□□ 0.61
GAPDH-201ENST00000229239 ASIC1P78348 528 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 PDE4DQ08499 809 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 RBL2Q08999 1139 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 GRB10Q13322 594 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 SEPT2Q15019 361 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 TTI2Q6NXR4 508 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 ZNF710Q8N1W2 664 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 PLIN2Q99541 437 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 A0A1W2PQC6 194 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 ITGBL1O95965 494 aaPredicted RBP18.86■□□□□ 0.61
GAPDH-201ENST00000229239 GOLGA8FQ08AF8 430 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 GOLGA8DPQ0D2H9 430 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
GAPDH-201ENST00000229239 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
GAPDH-201ENST00000229239 FOXR2Q6PJQ5 311 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 SYT10Q6XYQ8 523 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 MICALL2Q8IY33 904 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 P2RX5Q93086 422 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 PSME4Q14997 1843 aa18.86■□□□□ 0.61
GAPDH-201ENST00000229239 KDM3AQ9Y4C1 1321 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 CYP3A7-CYP3A51PA0A087WV96 503 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 SLU7O95391 586 aaKnown RBP18.85■□□□□ 0.61
GAPDH-201ENST00000229239 CYP3A7P24462 503 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 UBE2SQ16763 222 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 TMEM119Q4V9L6 283 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 UNC13DQ70J99 1090 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 LARP4BQ92615 738 aaKnown RBP18.85■□□□□ 0.61
GAPDH-201ENST00000229239 TRIM47Q96LD4 638 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
GAPDH-201ENST00000229239 TDRD3Q9H7E2 651 aaKnown RBP18.85■□□□□ 0.61
GAPDH-201ENST00000229239 PCDHA1Q9Y5I3 950 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms