RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 FAM169AQ9Y6X4 670 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
NUP88-201ENST00000225696 TACC1O75410 805 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 APBA1Q02410 837 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 RASSF7Q02833 373 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 PPARDQ03181 441 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 PPFIA1Q13136 1202 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 PDCLQ13371 301 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 PARP10Q53GL7 1025 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 STIM2Q9P246 746 aa13.78□□□□□ -0.2
NUP88-201ENST00000225696 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
NUP88-201ENST00000225696 PHLPP1O60346 1717 aa13.77□□□□□ -0.2
NUP88-201ENST00000225696 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.2
NUP88-201ENST00000225696 AKR1B10O60218 316 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 MYL1P05976 194 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 SLC1A4P43007 532 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
NUP88-201ENST00000225696 ATP1A2P50993 1020 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 GRM4Q14833 912 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 BAP1Q92560 729 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
NUP88-201ENST00000225696 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
NUP88-201ENST00000225696 A0A087WUV0 522 aaPredicted RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 BICDL2A1A5D9 508 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 MYMKA6NI61 221 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 LRRC41Q15345 812 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 CENPPQ6IPU0 288 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 DEF6Q9H4E7 631 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 LCA5LO95447 670 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 CPP00450 1065 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 MAGEA1P43355 309 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 BICDL1Q6ZP65 573 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 KANSL2Q9H9L4 492 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 BLOC1S4Q9NUP1 217 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 PACSIN2Q9UNF0 486 aaPredicted RBP13.76□□□□□ -0.21
NUP88-201ENST00000225696 STX8Q9UNK0 236 aa13.76□□□□□ -0.21
NUP88-201ENST00000225696 MYH1P12882 1939 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 ZNF233A6NK53 670 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 EBAG9O00559 213 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 PRLRP16471 622 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 PRPHP41219 470 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 KCNQ4P56696 695 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 GRIK5Q16478 980 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 HGSNATQ68CP4 663 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 TMED8Q6PL24 325 aaPredicted RBP13.75□□□□□ -0.21
NUP88-201ENST00000225696 DGKHQ86XP1 1220 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 NUDT12Q9BQG2 462 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 KIAA1551Q9HCM1 1747 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 NFU1Q9UMS0 254 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 TLR2O60603 784 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 TXKP42681 527 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 EPHB4P54760 987 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 SIK1P57059 783 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 ITIH3Q06033 890 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 GRB10Q13322 594 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 FAM114A1Q8IWE2 563 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 NLRC4Q9NPP4 1024 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
NUP88-201ENST00000225696 GOLGA8KD6RF30 607 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 ERLIN2O94905 339 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 TCP1P17987 556 aaKnown RBP13.74□□□□□ -0.21
NUP88-201ENST00000225696 PDE4CQ08493 712 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 KCNMA1Q12791 1236 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 CCDC70Q6NSX1 233 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 C8orf74Q6P047 294 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
NUP88-201ENST00000225696 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms