RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 HMGCRP04035 888 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 USP17L6PQ6QN14 398 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 HSCBQ8IWL3 235 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 TAAR1Q96RJ0 339 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 TINF2Q9BSI4 451 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 C6orf50Q9HD87 102 aa27.12■■□□□ 1.93
HOMER3-201ENST00000221222 LRRC37A2A6NM11 1700 aa27.11■■□□□ 1.93
HOMER3-201ENST00000221222 XBP1P17861 261 aa27.11■■□□□ 1.93
HOMER3-201ENST00000221222 GNA11P29992 359 aa27.11■■□□□ 1.93
HOMER3-201ENST00000221222 ALDH5A1P51649 535 aaPredicted RBP27.11■■□□□ 1.93
HOMER3-201ENST00000221222 BIN2Q9UBW5 565 aaPredicted RBP27.11■■□□□ 1.93
HOMER3-201ENST00000221222 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.11■■□□□ 1.93
HOMER3-201ENST00000221222 SYNGAP1Q96PV0 1343 aa27.11■■□□□ 1.93
HOMER3-201ENST00000221222 ASB14A6NK59 587 aa27.1■■□□□ 1.93
HOMER3-201ENST00000221222 CLK2P49760 499 aaKnown RBP27.1■■□□□ 1.93
HOMER3-201ENST00000221222 MORC4Q8TE76 937 aa27.1■■□□□ 1.93
HOMER3-201ENST00000221222 RMDN3Q96TC7 470 aa27.1■■□□□ 1.93
HOMER3-201ENST00000221222 FRMPD4Q14CM0 1322 aa27.1■■□□□ 1.93
HOMER3-201ENST00000221222 NLRP5P59047 1200 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 UBE2SQ16763 222 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 MFSD14CQ5VZR4 134 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 GALNT17Q6IS24 598 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 FCHSD1Q86WN1 690 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 BICD2Q8TD16 824 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 NSUN6Q8TEA1 469 aaKnown RBP27.09■■□□□ 1.93
HOMER3-201ENST00000221222 PHF20Q9BVI0 1012 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 PXMP2Q9NR77 195 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 EDNRBP24530 442 aa27.09■■□□□ 1.93
HOMER3-201ENST00000221222 INHAP05111 366 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 CYP2C19P33261 490 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 NPY5RQ15761 445 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 ARMCX2Q7L311 632 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 FAM184AQ8NB25 1140 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 DAGLBQ8NCG7 672 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 INTS4Q96HW7 963 aaKnown RBP27.08■■□□□ 1.93
HOMER3-201ENST00000221222 IWS1Q96ST2 819 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 MPHOSPH6Q99547 160 aaKnown RBP27.08■■□□□ 1.93
HOMER3-201ENST00000221222 GJB4Q9NTQ9 266 aa27.08■■□□□ 1.93
HOMER3-201ENST00000221222 RPTORQ8N122 1335 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 B4DLN1 442 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 FOSP01100 380 aaPredicted RBP27.07■■□□□ 1.92
HOMER3-201ENST00000221222 TRIM32Q13049 653 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 AP3B2Q13367 1082 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 MAP3K21Q5TCX8 1036 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 ARHGEF16Q5VV41 709 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 MCTP2Q6DN12 878 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 REXO1Q8N1G1 1221 aaKnown RBP27.07■■□□□ 1.92
HOMER3-201ENST00000221222 NRBP1Q9UHY1 535 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 PCDHA4Q9UN74 947 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 KCNJ14Q9UNX9 436 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 SMC3Q9UQE7 1217 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 KIF3AQ9Y496 699 aa27.07■■□□□ 1.92
HOMER3-201ENST00000221222 SPDYE3A6NKU9 549 aa27.06■■□□□ 1.92
HOMER3-201ENST00000221222 ADAMTS3O15072 1205 aa27.06■■□□□ 1.92
HOMER3-201ENST00000221222 SNAI1O95863 264 aaPredicted RBP27.06■■□□□ 1.92
HOMER3-201ENST00000221222 PDCD2LQ9BRP1 358 aa27.06■■□□□ 1.92
HOMER3-201ENST00000221222 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.06■■□□□ 1.92
HOMER3-201ENST00000221222 CCL5P13501 91 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 PRKAR2AP13861 404 aaKnown RBP27.05■■□□□ 1.92
HOMER3-201ENST00000221222 EIF2AK2P19525 551 aaKnown RBP27.05■■□□□ 1.92
HOMER3-201ENST00000221222 GJB2P29033 226 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 UBXN2AP68543 259 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 CACNB2Q08289 660 aaPredicted RBP27.05■■□□□ 1.92
HOMER3-201ENST00000221222 BLIDQ8IZY5 108 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 PCDHA6Q9UN73 950 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 PCDHA8Q9Y5H6 950 aa27.05■■□□□ 1.92
HOMER3-201ENST00000221222 M0R2N6 131 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 CYBAP13498 195 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 TRIM29Q14134 588 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 PGM5Q15124 567 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 C8orf76Q96K31 380 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 ABHD16BQ9H3Z7 469 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 TMEM260Q9NX78 707 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 CNPY2Q9Y2B0 182 aa27.04■■□□□ 1.92
HOMER3-201ENST00000221222 NR3C2P08235 984 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 PDE4DQ08499 809 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 KRT40Q6A162 431 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 KATNBL1Q9H079 304 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 RNF208Q9H0X6 261 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 EHMT1Q9H9B1 1298 aa27.03■■□□□ 1.92
HOMER3-201ENST00000221222 DDX49Q9Y6V7 483 aaKnown RBP27.03■■□□□ 1.92
HOMER3-201ENST00000221222 MMP1P03956 469 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 JAKMIP3Q5VZ66 844 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 VSIG10LQ86VR7 867 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 IL31RAQ8NI17 732 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 ANO3Q9BYT9 981 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 CEP290O15078 2479 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 KIAA1217Q5T5P2 1943 aa27.02■■□□□ 1.92
HOMER3-201ENST00000221222 STXBP2Q15833 593 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 XRRA1Q6P2D8 792 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 TRPV1Q8NER1 839 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 FBXO18Q8NFZ0 1043 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 RASGRP4Q8TDF6 673 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 UNC93B1Q9H1C4 597 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 VTA1Q9NP79 307 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 MYH7BA7E2Y1 1941 aa27.01■■□□□ 1.91
HOMER3-201ENST00000221222 ZNF865P0CJ78 1059 aaPredicted RBP27■■□□□ 1.91
HOMER3-201ENST00000221222 CCND2P30279 289 aa27■■□□□ 1.91
HOMER3-201ENST00000221222 ACVR2BQ13705 512 aa27■■□□□ 1.91
HOMER3-201ENST00000221222 PCNX4Q63HM2 1172 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms