RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 C8BP07358 591 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 PAMP19021 973 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
CDKN3-201ENST00000216414 TTC9BQ8N6N2 239 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 FGD4Q96M96 766 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 GORASP1Q9BQQ3 440 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 MTA3Q9BTC8 594 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 SLITRK6Q9H5Y7 841 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 INVSQ9Y283 1065 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 LTBP3Q9NS15 1303 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 NPHP3-ACAD11A0A0J9YXS1 232 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 NPHS1O60500 1241 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 THBS2P35442 1172 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 AMPD2Q01433 879 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 KIAA2012Q0VF49 1180 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 ETV3LQ6ZN32 361 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 CCDC81Q6ZN84 652 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 STK32CQ86UX6 486 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 LGI4Q8N135 537 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 RBBP8NLQ8NC74 664 aaPredicted RBP4.84□□□□□ -1.63
CDKN3-201ENST00000216414 SYT3Q9BQG1 590 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 C11orf84Q9BUA3 381 aaPredicted RBP4.84□□□□□ -1.63
CDKN3-201ENST00000216414 ST6GALNAC2Q9UJ37 374 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 PCDHB10Q9UN67 800 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 SUGT1Q9Y2Z0 365 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 PCDHGB7Q9Y5F8 929 aa4.84□□□□□ -1.63
CDKN3-201ENST00000216414 TRBV23OR9-2A0A075B6M9 112 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 MROH6A6NGR9 719 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 PPM1BO75688 479 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 C6P13671 934 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 RPL13P26373 211 aaKnown RBP4.83□□□□□ -1.64
CDKN3-201ENST00000216414 ZNF76P36508 570 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 ZNF394Q53GI3 561 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 MCTP2Q6DN12 878 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 BORAQ6PGQ7 559 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 GLB1LQ6UWU2 654 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 FAM124AQ86V42 546 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 DCP2Q8IU60 420 aaKnown RBP4.83□□□□□ -1.64
CDKN3-201ENST00000216414 CRBNQ96SW2 442 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 C1QTNF3Q9BXJ4 246 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 KLHL25Q9H0H3 589 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.83□□□□□ -1.642e-9■■□□□ 12.2
CDKN3-201ENST00000216414 CGGBP1Q9UFW8 167 aaPredicted RBP4.83□□□□□ -1.64
CDKN3-201ENST00000216414 SLC12A7Q9Y666 1083 aa4.83□□□□□ -1.64
CDKN3-201ENST00000216414 C7orf72A4D263 438 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 CYR61O00622 381 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 EPHX1P07099 455 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 SLC7A5Q01650 507 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 FAM26FQ5R3K3 315 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 USP51Q70EK9 711 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 LIMS2Q7Z4I7 341 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 KYQ8NBH2 561 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 DVL3Q92997 716 aaPredicted RBP4.82□□□□□ -1.64
CDKN3-201ENST00000216414 SCAND2PQ9GZW5 306 aaPredicted RBP4.82□□□□□ -1.64
CDKN3-201ENST00000216414 AP5M1Q9H0R1 490 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 GZF1Q9H116 711 aaPredicted RBP4.82□□□□□ -1.64
CDKN3-201ENST00000216414 BTG4Q9NY30 223 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 MARCH2Q9P0N8 246 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 CLEC1BQ9P126 229 aa4.82□□□□□ -1.64
CDKN3-201ENST00000216414 TACR2P21452 398 aa4.81□□□□□ -1.64
CDKN3-201ENST00000216414 C9orf131Q5VYM1 1079 aa4.81□□□□□ -1.64
CDKN3-201ENST00000216414 ZC3H18Q86VM9 953 aaKnown RBP4.81□□□□□ -1.64
CDKN3-201ENST00000216414 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
CDKN3-201ENST00000216414 PHAXQ9H814 394 aaKnown RBP4.81□□□□□ -1.64
CDKN3-201ENST00000216414 PCDH18Q9HCL0 1135 aa4.81□□□□□ -1.64
CDKN3-201ENST00000216414 DDX3XO00571 662 aaKnown RBP eCLIP4.8□□□□□ -1.641e-6■■■□□ 16.8
CDKN3-201ENST00000216414 GRB10Q13322 594 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 LDLRAD1Q5T700 205 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 SPRED1Q7Z699 444 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 ZFPM1Q8IX07 1006 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 TTLL6Q8N841 843 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 TXNDC5Q8NBS9 432 aaKnown RBP4.8□□□□□ -1.64
CDKN3-201ENST00000216414 PLEKHO2Q8TD55 490 aa4.8□□□□□ -1.64
CDKN3-201ENST00000216414 KISS1RQ969F8 398 aaPredicted RBP4.8□□□□□ -1.64
CDKN3-201ENST00000216414 SGSM2O43147 1006 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 PLS3P13797 630 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 ITGA1P56199 1179 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 EIF6P56537 245 aaKnown RBP4.79□□□□□ -1.64
CDKN3-201ENST00000216414 SCRN1Q12765 414 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 MBLAC2Q68D91 279 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 TEX2Q8IWB9 1127 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 SSBP3Q9BWW4 388 aaPredicted RBP4.79□□□□□ -1.64
CDKN3-201ENST00000216414 GPRC5CQ9NQ84 441 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 GINM1Q9NU53 330 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 AKT3Q9Y243 479 aa4.79□□□□□ -1.64
CDKN3-201ENST00000216414 A0A1W2PQH9 124 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 KCNH1O95259 989 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 SLPIP03973 132 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 CYP1A1P04798 512 aaPredicted RBP4.78□□□□□ -1.64
CDKN3-201ENST00000216414 THBDP07204 575 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 STAT5AP42229 794 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
CDKN3-201ENST00000216414 FANCCQ00597 558 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 PPP2R5EQ16537 467 aa4.78□□□□□ -1.64
CDKN3-201ENST00000216414 CRB2Q5IJ48 1285 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms