RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SCFD2Q8WU76 684 aa17.52■□□□□ 0.4
UPK3A-201ENST00000216211 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
UPK3A-201ENST00000216211 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
UPK3A-201ENST00000216211 CNNM2Q9H8M5 875 aa17.52■□□□□ 0.4
UPK3A-201ENST00000216211 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
UPK3A-201ENST00000216211 B4DLN1 442 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 ARIH2O95376 493 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 PBX2P40425 430 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 GRIN2CQ14957 1233 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 CYB5R4Q7L1T6 521 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 PPP1R13LQ8WUF5 828 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TIFAQ96CG3 184 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TAAR1Q96RJ0 339 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 PBX4Q9BYU1 374 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TANC1Q9C0D5 1861 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 WNT8AQ9H1J5 351 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 JMJD4Q9H9V9 463 aa17.51■□□□□ 0.39
UPK3A-201ENST00000216211 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
UPK3A-201ENST00000216211 RAD50Q92878 1312 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 FGBP02675 491 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 STAG2Q8N3U4 1231 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 SYTL5Q8TDW5 730 aaPredicted RBP17.5■□□□□ 0.39
UPK3A-201ENST00000216211 HERVK_113Q902F9 699 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 SCLYQ96I15 445 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 ZNF576Q9H609 170 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
UPK3A-201ENST00000216211 COL20A1Q9P218 1284 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
UPK3A-201ENST00000216211 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
UPK3A-201ENST00000216211 CYP2C9P11712 490 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 SEC23AQ15436 765 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 BRDTQ58F21 947 aaPredicted RBP17.49■□□□□ 0.39
UPK3A-201ENST00000216211 FAM47CQ5HY64 1035 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 OTOP2Q7RTS6 562 aa17.49■□□□□ 0.39
UPK3A-201ENST00000216211 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
UPK3A-201ENST00000216211 MYO9BQ13459 2157 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 A6NJR5 290 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 PTH1RQ03431 593 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 MCF2L2Q86YR7 1114 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 NSUN6Q8TEA1 469 aaKnown RBP17.48■□□□□ 0.39
UPK3A-201ENST00000216211 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
UPK3A-201ENST00000216211 MAF1Q9H063 256 aa17.48■□□□□ 0.39
UPK3A-201ENST00000216211 MTIF3Q9H2K0 278 aaKnown RBP17.48■□□□□ 0.39
UPK3A-201ENST00000216211 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 CFBP00751 764 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 EIF2AK2P19525 551 aaKnown RBP17.47■□□□□ 0.39
UPK3A-201ENST00000216211 CHMLP26374 656 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 CCDC62Q6P9F0 684 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 RPUSD2Q8IZ73 545 aaKnown RBP17.47■□□□□ 0.39
UPK3A-201ENST00000216211 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 RMDN3Q96TC7 470 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 MAD2L2Q9UI95 211 aa17.47■□□□□ 0.39
UPK3A-201ENST00000216211 VCANP13611 3396 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 KPNA6O60684 536 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 CYP21A2P08686 494 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 CHMP4BP1P59074 171 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 TRDNQ13061 729 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 STXBP2Q15833 593 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 ARHGEF16Q5VV41 709 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 CHST3Q7LGC8 479 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 RUFY2Q8WXA3 655 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 IWS1Q96ST2 819 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
UPK3A-201ENST00000216211 SPTBN5Q9NRC6 3674 aaKnown RBP17.45■□□□□ 0.38
UPK3A-201ENST00000216211 OPLAHO14841 1288 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
UPK3A-201ENST00000216211 GH1P01241 217 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 MMP3P08254 477 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 ARHGAP1Q07960 439 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 RAB30Q15771 203 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 DEFB128Q7Z7B8 93 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 AFG1LQ8WV93 481 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 MSRAQ9UJ68 235 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 TAF6LQ9Y6J9 622 aa17.45■□□□□ 0.38
UPK3A-201ENST00000216211 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 PALM3A6NDB9 673 aaPredicted RBP17.44■□□□□ 0.38
UPK3A-201ENST00000216211 ZBBXA8MT70 800 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 ZBTB5O15062 677 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 MTMR8Q96EF0 704 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 SENP2Q9HC62 589 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms