RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
EFNB1-201ENST00000204961 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 LRRC1Q9BTT6 524 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 BARHL2Q9NY43 387 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 L1RE1Q9UN81 338 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 TMCO5BA8MYB1 307 aa16.77■□□□□ 0.28
EFNB1-201ENST00000204961 ORC4O43929 436 aa16.77■□□□□ 0.28
EFNB1-201ENST00000204961 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
EFNB1-201ENST00000204961 AKR1B1P15121 316 aa16.77■□□□□ 0.28
EFNB1-201ENST00000204961 GGCXP38435 758 aa16.77■□□□□ 0.28
EFNB1-201ENST00000204961 RAPGEF1Q13905 1077 aa16.77■□□□□ 0.28
EFNB1-201ENST00000204961 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
EFNB1-201ENST00000204961 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
EFNB1-201ENST00000204961 BRD3Q15059 726 aa16.77■□□□□ 0.27
EFNB1-201ENST00000204961 PPP2R5BQ15173 497 aa16.77■□□□□ 0.27
EFNB1-201ENST00000204961 TXLNBQ8N3L3 684 aa16.77■□□□□ 0.27
EFNB1-201ENST00000204961 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.27
EFNB1-201ENST00000204961 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.27
EFNB1-201ENST00000204961 EPS15P42566 896 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 MAGEA1P43355 309 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 DNM2P50570 870 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 POLR2FP61218 127 aaKnown RBP16.76■□□□□ 0.27
EFNB1-201ENST00000204961 KLHL7Q8IXQ5 586 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 SMARCC1Q92922 1105 aaPredicted RBP16.76■□□□□ 0.27
EFNB1-201ENST00000204961 PKD2L1Q9P0L9 805 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 HYOU1Q9Y4L1 999 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 LMTK3Q96Q04 1460 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 TRADDQ15628 312 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 MAEAQ7L5Y9 396 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 DDX12PQ92771 950 aa16.76■□□□□ 0.27
EFNB1-201ENST00000204961 ZEB2O60315 1214 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 GRM4Q14833 912 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 SALL4Q9UJQ4 1053 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 KIAA1024Q9UPX6 916 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 SAMM50Q9Y512 469 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 CCNE1P24864 410 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 SLC1A4P43007 532 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 NOP2P46087 812 aaKnown RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 ECM1Q16610 540 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 SH2D3CQ8N5H7 860 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 KCNQ5Q9NR82 932 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 CHMP2AO43633 222 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 ACTN1P12814 892 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 DCAF17Q5H9S7 520 aaPredicted RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 GIMAP8Q8ND71 665 aaPredicted RBP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
EFNB1-201ENST00000204961 ARHGAP20Q9P2F6 1191 aa16.75■□□□□ 0.27
EFNB1-201ENST00000204961 MYO1CO00159 1063 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 DGKHQ86XP1 1220 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 RASSF4Q9H2L5 321 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 NDST4Q9H3R1 872 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 HAUS4Q9H6D7 363 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 CD209Q9NNX6 404 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
EFNB1-201ENST00000204961 KIF11P52732 1056 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 KRT83P78385 493 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 ZYXQ15942 572 aaKnown RBP16.74■□□□□ 0.27
EFNB1-201ENST00000204961 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
EFNB1-201ENST00000204961 MMTAG2Q9BU76 263 aaKnown RBP16.74■□□□□ 0.27
EFNB1-201ENST00000204961 SEPT11Q9NVA2 429 aaKnown RBP16.74■□□□□ 0.27
EFNB1-201ENST00000204961 CHD4Q14839 1912 aa16.74■□□□□ 0.27
EFNB1-201ENST00000204961 MYH3P11055 1940 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 CICQ96RK0 1608 aaPredicted RBP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 BACH1O14867 736 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 EHHADHQ08426 723 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 WHAMMP3Q1A5X7 153 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 KRT79Q5XKE5 535 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 ZNF804AQ7Z570 1209 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 LARP4BQ92615 738 aaKnown RBP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 SH2D3AQ9BRG2 576 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 POTECB2RU33 542 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 RDH13Q8NBN7 331 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 WDR66Q8TBY9 1149 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 PACSIN1Q9BY11 444 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 ITGB4P16144 1822 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 TULP2O00295 520 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
EFNB1-201ENST00000204961 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
EFNB1-201ENST00000204961 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms