RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PALMO75781 387 aa22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 RHOBTB3O94955 611 aa22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 CCDC121Q6ZUS5 278 aa22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 DDX42Q86XP3 938 aaKnown RBP eCLIP22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 RETREG2Q8NC44 543 aa22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
PPP1R3F-201ENST00000055335 CCNT1O60563 726 aaKnown RBP22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 CCDC40Q4G0X9 1142 aa22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 ECM29Q5VYK3 1845 aa22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 DHTKD1Q96HY7 919 aaPredicted RBP22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 PFKFB3Q16875 520 aaPredicted RBP22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 PLAGL2Q9UPG8 496 aa22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 AKAP11Q9UKA4 1901 aa22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 PURBQ96QR8 312 aaKnown RBP22.21■■□□□ 1.15
PPP1R3F-201ENST00000055335 TRAPPC10P48553 1259 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 KIRREL3Q8IZU9 778 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 MYCBPAPQ8TBZ2 947 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 KLC4Q9NSK0 619 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 PTGISQ16647 500 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 ARL6IP4Q66PJ3 421 aaKnown RBP22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 CCDC13Q8IYE1 715 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 CASKIN2Q8WXE0 1202 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 TRIM9Q9C026 710 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 STX8Q9UNK0 236 aa22.2■■□□□ 1.14
PPP1R3F-201ENST00000055335 CALML3P27482 149 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 CHRNDQ07001 517 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 KLHDC7AQ5VTJ3 777 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 TBC1D7Q9P0N9 293 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 TXKP42681 527 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 RCAN1P53805 252 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 SKOR1P84550 965 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 VWA3BQ502W6 1294 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 C4orf32Q8N8J7 132 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 UBLCP1Q8WVY7 318 aaPredicted RBP22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 SEMA6BQ9H3T3 888 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 SUFUQ9UMX1 484 aa22.19■■□□□ 1.14
PPP1R3F-201ENST00000055335 MDH1P40925 334 aaKnown RBP22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 KCNB1Q14721 858 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 AP1M1Q9BXS5 423 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 PCDHA4Q9UN74 947 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 MYH7P12883 1935 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 PDHBP11177 359 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 NF2P35240 595 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 FNTAP49354 379 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 SUSD4Q5VX71 490 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 N4BP2L2Q92802 583 aaPredicted RBP22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 ATP6V1G3Q96LB4 118 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 TRIM31Q9BZY9 425 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 KBTBD4Q9NVX7 518 aa22.18■■□□□ 1.14
PPP1R3F-201ENST00000055335 DDAH1O94760 285 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 RAPGEF1Q13905 1077 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 IQCKQ8N0W5 287 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 KCNK3O14649 394 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 TBC1D5Q92609 795 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 ZKSCAN4Q969J2 545 aaPredicted RBP22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 CDK5RAP3Q96JB5 506 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 ADAMTS1Q9UHI8 967 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 NID2Q14112 1375 aa22.17■■□□□ 1.14
PPP1R3F-201ENST00000055335 TMCO5BA8MYB1 307 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 RAD51CO43502 376 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 RPSAP08865 295 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 SCP2P22307 547 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 KIF5BP33176 963 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 KIAA0753Q2KHM9 967 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 BANK1Q8NDB2 785 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 TNS3Q68CZ2 1445 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 USP54Q70EL1 1684 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 MYH2Q9UKX2 1941 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 CTNNA1P35221 906 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 POLR2FP61218 127 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 KDM7AQ6ZMT4 941 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 KIAA0895Q8NCT3 520 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 GLIS3Q8NEA6 775 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 TAF4BQ92750 862 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 CAVIN3Q969G5 261 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 MCM9Q9NXL9 1143 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 MYZAPP0CAP1 466 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 EPB41P11171 864 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 KLRC1P26715 233 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 TFAP4Q01664 338 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 ERGIC2Q96RQ1 377 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 PACSIN1Q9BY11 444 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 SLC40A1Q9NP59 571 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 HAUS2Q9NVX0 235 aa22.16■■□□□ 1.14
PPP1R3F-201ENST00000055335 CEP104O60308 925 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 TJP1Q07157 1748 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 GSCP56915 257 aaPredicted RBP22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 ODF2LQ9ULJ1 636 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 MYH6P13533 1939 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 SMIM23A6NLE4 172 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 TULP1O00294 542 aaPredicted RBP22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 CHUKO15111 745 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 ZNF662Q6ZS27 426 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 PNMA1Q8ND90 353 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 CYFIP2Q96F07 1278 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 RIOK1Q9BRS2 568 aaKnown RBP22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 ZHX3Q9H4I2 956 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 PCDHA6Q9UN73 950 aa22.15■■□□□ 1.14
PPP1R3F-201ENST00000055335 PCDHA8Q9Y5H6 950 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms