RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 SCN11AQ9UI33 1791 aa5.48□□□□□ -1.53
CDH17-201ENST00000027335 CACNA1FO60840 1977 aa5.48□□□□□ -1.53
CDH17-201ENST00000027335 MACROD2A1Z1Q3 448 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 GOLGA6L9A6NEM1 432 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TMCO5BA8MYB1 307 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TBCAO75347 108 aaKnown RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 ZSCAN20P17040 1043 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 PPP2R5BQ15173 497 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CCDC144BQ3MJ40 725 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 MAEAQ7L5Y9 396 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CABP7Q86V35 215 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TTC30AQ86WT1 665 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TAF4BQ92750 862 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TEKT1Q969V4 418 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 MRFAP1L1Q96HT8 127 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CCDC42Q96M95 316 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 PSMB7Q99436 277 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 SLF1Q9BQI6 1058 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 RNF26Q9BY78 433 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 PPP1R12BO60237 982 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 PHACTR2O75167 634 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 SLURP2P0DP57 97 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 PLCD1P51178 756 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 SPECC1LQ69YQ0 1117 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 FBXO33Q7Z6M2 555 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CLEC10AQ8IUN9 316 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 FAM114A1Q8IWE2 563 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 FMR1NBQ8N0W7 255 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CPXCR1Q8N123 301 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 COA7Q96BR5 231 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 NOC4LQ9BVI4 516 aaKnown RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 FOXP1Q9H334 677 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 UBR3Q6ZT12 1888 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 NAT2P11245 290 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 EVCP57679 992 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 IFT88Q13099 833 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 PRPF4BQ13523 1007 aaKnown RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 CALCRLQ16602 461 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 LCA5Q86VQ0 697 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 PAF1Q8N7H5 531 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TTLL6Q8N841 843 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TBC1D22AQ8WUA7 517 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 HINFPQ9BQA5 517 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 CRACR2AQ9BSW2 395 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 TDRD3Q9H7E2 651 aaKnown RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 DCP1AQ9NPI6 582 aaPredicted RBP5.47□□□□□ -1.53
CDH17-201ENST00000027335 PRR12Q9ULL5 1215 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 RIC1Q4ADV7 1423 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 KDM3BQ7LBC6 1761 aa5.47□□□□□ -1.53
CDH17-201ENST00000027335 PPP6R2O75170 966 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 CFBP00751 764 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 CYLC1P35663 651 aaPredicted RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 PAFAH1B1P43034 410 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 ADCY7P51828 1080 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 RNASE9P60153 205 aaKnown RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 NAA30Q147X3 362 aaPredicted RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 GPR162Q16538 588 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 HERC4Q5GLZ8 1057 aaPredicted RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 CCDC122Q5T0U0 273 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 USP49Q70CQ1 688 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 KCTD1Q719H9 257 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 CNGA4Q8IV77 575 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 LSM14AQ8ND56 463 aaKnown RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 PIGSQ96S52 555 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 SLC39A2Q9NP94 309 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 FAM207AQ9NSI2 230 aaPredicted RBP5.46□□□□□ -1.53
CDH17-201ENST00000027335 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 ADAMTS7Q9UKP4 1686 aa5.46□□□□□ -1.53
CDH17-201ENST00000027335 CTAGE9A4FU28 777 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 DDX39AO00148 427 aaKnown RBP5.46□□□□□ -1.54
CDH17-201ENST00000027335 ARHGAP6O43182 974 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 GDF11O95390 407 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 SRGNP10124 158 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 GTF2F1P35269 517 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDH17-201ENST00000027335 TNIP1Q15025 636 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 DCAF17Q5H9S7 520 aaPredicted RBP5.46□□□□□ -1.54
CDH17-201ENST00000027335 NCAPH2Q6IBW4 605 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 ARHGAP27Q6ZUM4 889 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 KRT25Q7Z3Z0 450 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 NIM1KQ8IY84 436 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 ERMNQ8TAM6 284 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 IGDCC4Q8TDY8 1250 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 STAG1Q8WVM7 1258 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 GOPCQ9HD26 462 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 IMPACTQ9P2X3 320 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 MAN1B1Q9UKM7 699 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 ATP6V0A2Q9Y487 856 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 DYTNA2CJ06 578 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 CTAGE15A4D2H0 777 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 TMEM232C9JQI7 657 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 GTPBP6O43824 516 aaPredicted RBP5.46□□□□□ -1.54
CDH17-201ENST00000027335 ECE2O60344 883 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 CTAGE8P0CG41 777 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 DPEP1P16444 411 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 KIF5AQ12840 1032 aa5.46□□□□□ -1.54
CDH17-201ENST00000027335 BMS1Q14692 1282 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms