RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CHD7Q9P2D1 2997 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 RAD50Q92878 1312 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 TET1Q8NFU7 2136 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 TTC28Q96AY4 2481 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 FGBP02675 491 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 ACRP10323 421 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 PDE4AP27815 886 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 PTPN11Q06124 597 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-201ENST00000013807 BRDTQ58F21 947 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-201ENST00000013807 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 MCF2L2Q86YR7 1114 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 OR6J1Q8NGC5 347 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 TIFAQ96CG3 184 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 MTMR8Q96EF0 704 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 IWS1Q96ST2 819 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 PBX4Q9BYU1 374 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 WNT8AQ9H1J5 351 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
ERCC1-201ENST00000013807 TANC1Q9C0D5 1861 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 TRANK1O15050 2925 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 PARP1P09874 1014 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 TTLL4Q14679 1199 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 GRIN2CQ14957 1233 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 QRICH1Q2TAL8 776 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 USH1GQ495M9 461 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 RPUSD2Q8IZ73 545 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 SAMD3Q8N6K7 520 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 SYTL5Q8TDW5 730 aaPredicted RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 NSUN6Q8TEA1 469 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
ERCC1-201ENST00000013807 MTIF3Q9H2K0 278 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 MAP3K20Q9NYL2 800 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 MRPL11Q9Y3B7 192 aaKnown RBP18.54■□□□□ 0.56
ERCC1-201ENST00000013807 FOSL2P15408 326 aa18.53■□□□□ 0.56
ERCC1-201ENST00000013807 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
ERCC1-201ENST00000013807 UBAC1Q9BSL1 405 aa18.53■□□□□ 0.56
ERCC1-201ENST00000013807 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
ERCC1-201ENST00000013807 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
ERCC1-201ENST00000013807 COL20A1Q9P218 1284 aa18.53■□□□□ 0.56
ERCC1-201ENST00000013807 NCOR1O75376 2440 aa18.53■□□□□ 0.56
ERCC1-201ENST00000013807 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
ERCC1-201ENST00000013807 ARIH2O95376 493 aa18.52■□□□□ 0.56
ERCC1-201ENST00000013807 PFKMP08237 780 aa18.52■□□□□ 0.56
ERCC1-201ENST00000013807 STXBP2Q15833 593 aa18.52■□□□□ 0.56
ERCC1-201ENST00000013807 NBPF20Q3BBV1 942 aa18.52■□□□□ 0.56
ERCC1-201ENST00000013807 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.56
ERCC1-201ENST00000013807 TAAR1Q96RJ0 339 aa18.52■□□□□ 0.56
ERCC1-201ENST00000013807 COL25A1Q9BXS0 654 aaPredicted RBP18.52■□□□□ 0.56
ERCC1-201ENST00000013807 TRMT13Q9NUP7 481 aaKnown RBP18.52■□□□□ 0.56
ERCC1-201ENST00000013807 GRXCR1A8MXD5 290 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 PITPNM1O00562 1244 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 OPLAHO14841 1288 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 MYL3P08590 195 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 PBX2P40425 430 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 HSD17B4P51659 736 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 CCL23P55773 120 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 RAB30Q15771 203 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 STAG2Q8N3U4 1231 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 COPS5Q92905 334 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 EMID1Q96A84 441 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-201ENST00000013807 RMDN3Q96TC7 470 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 AMNQ9BXJ7 453 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 MAD2L2Q9UI95 211 aa18.51■□□□□ 0.55
ERCC1-201ENST00000013807 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
ERCC1-201ENST00000013807 KLRF2D3W0D1 207 aa18.5■□□□□ 0.55
ERCC1-201ENST00000013807 EIF3JO75822 258 aaKnown RBP18.5■□□□□ 0.55
ERCC1-201ENST00000013807 CHMLP26374 656 aa18.5■□□□□ 0.55
ERCC1-201ENST00000013807 STOX1Q6ZVD7 989 aa18.5■□□□□ 0.55
ERCC1-201ENST00000013807 CYB5R4Q7L1T6 521 aa18.5■□□□□ 0.55
ERCC1-201ENST00000013807 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
ERCC1-201ENST00000013807 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
ERCC1-201ENST00000013807 ZBTB5O15062 677 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 CYP21A2P08686 494 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 RFC2P35250 354 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 ARHGAP1Q07960 439 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 OTOP2Q7RTS6 562 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
ERCC1-201ENST00000013807 DDX41Q9UJV9 622 aaKnown RBP18.49■□□□□ 0.55
ERCC1-201ENST00000013807 SPTBN5Q9NRC6 3674 aaKnown RBP18.48■□□□□ 0.55
ERCC1-201ENST00000013807 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
ERCC1-201ENST00000013807 GH1P01241 217 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 NR3C2P08235 984 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 MMP3P08254 477 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 CYP2C9P11712 490 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 TRDNQ13061 729 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 TRAF1Q13077 416 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 LY6KQ17RY6 165 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 SCLYQ96I15 445 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 PXMP2Q9NR77 195 aa18.48■□□□□ 0.55
ERCC1-201ENST00000013807 SGSM2O43147 1006 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 IQCF3P0C7M6 154 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 PTH1RQ03431 593 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 TROAPQ12815 778 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms