RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 USO1O60763 962 aaKnown RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 MAGEA1P43355 309 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 VWA3BQ502W6 1294 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 C12orf60Q5U649 245 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 SH2D3CQ8N5H7 860 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 RETREG2Q8NC44 543 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 TGFBRAP1Q8WUH2 860 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 RBM12Q9NTZ6 932 aaKnown RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 PLAGL2Q9UPG8 496 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 SIK3Q9Y2K2 1263 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 MYMKA6NI61 221 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 KCNQ2O43526 872 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 GNGT1P63211 74 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 SBK1Q52WX2 424 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 CCDC181Q5TID7 509 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 DGKHQ86XP1 1220 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 ZSCAN29Q8IWY8 852 aaPredicted RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 MMGT1Q8N4V1 131 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 TRIM58Q8NG06 486 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 GJA10Q969M2 543 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 MTMR8Q96EF0 704 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 C7orf25Q9BPX7 421 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 UBA5Q9GZZ9 404 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 A0A1B0GUL6 1792 aa15.58■□□□□ 0.09
USH1C-201ENST00000005226 LIG3P49916 1009 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 MAPKAPK5Q8IW41 473 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 CCDC47Q96A33 483 aaKnown RBP15.58■□□□□ 0.08
USH1C-201ENST00000005226 GPR101Q96P66 508 aaPredicted RBP15.58■□□□□ 0.08
USH1C-201ENST00000005226 NUDT12Q9BQG2 462 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 SLC1A4P43007 532 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 ATP1A2P50993 1020 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
USH1C-201ENST00000005226 HAUS3Q68CZ6 603 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 FAM114A1Q8IWE2 563 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
USH1C-201ENST00000005226 BCAS4Q8TDM0 211 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 TBCKQ8TEA7 893 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 TANGO6Q9C0B7 1094 aa15.58■□□□□ 0.08
USH1C-201ENST00000005226 MYH14Q7Z406 1995 aaKnown RBP15.57■□□□□ 0.08
USH1C-201ENST00000005226 FAM153BP0C7A2 387 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 SF3B3Q15393 1217 aaKnown RBP15.57■□□□□ 0.08
USH1C-201ENST00000005226 TRADDQ15628 312 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 FAM153CQ494X1 144 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 TTMPQ5BVD1 217 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 CCDC70Q6NSX1 233 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 TMED8Q6PL24 325 aaPredicted RBP15.57■□□□□ 0.08
USH1C-201ENST00000005226 CAPS2Q9BXY5 557 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 PACSIN2Q9UNF0 486 aaPredicted RBP15.57■□□□□ 0.08
USH1C-201ENST00000005226 NONOQ15233 471 aaKnown RBP eCLIP15.57■□□□□ 0.08
USH1C-201ENST00000005226 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 AMOTL1Q8IY63 956 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 FNBP4Q8N3X1 1017 aaPredicted RBP15.57■□□□□ 0.08
USH1C-201ENST00000005226 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 TLR10Q9BXR5 811 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 BLOC1S4Q9NUP1 217 aa15.57■□□□□ 0.08
USH1C-201ENST00000005226 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
USH1C-201ENST00000005226 KRT14P02533 472 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 MYL1P05976 194 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 ARID5AQ03989 594 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 GRB10Q13322 594 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 PDCLQ13371 301 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 IQCEQ6IPM2 695 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 CENPPQ6IPU0 288 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
USH1C-201ENST00000005226 TSGA10Q9BZW7 698 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 A0A1W2PQJ5 194 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 POTEMA6NI47 508 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 SHOX2O60902 331 aaPredicted RBP15.56■□□□□ 0.08
USH1C-201ENST00000005226 GLI1P08151 1106 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 CARSP49589 748 aaKnown RBP15.56■□□□□ 0.08
USH1C-201ENST00000005226 PTPROQ16827 1216 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 PNMA5Q96PV4 448 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 PIGSQ96S52 555 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
USH1C-201ENST00000005226 XIRP1Q702N8 1843 aaKnown RBP15.55■□□□□ 0.08
USH1C-201ENST00000005226 FTCDO95954 541 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 PRPHP41219 470 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 GUCY2FP51841 1108 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 CDK17Q00537 523 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 TDRD12Q587J7 1177 aaKnown RBP15.55■□□□□ 0.08
USH1C-201ENST00000005226 KLHDC7AQ5VTJ3 777 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 CNNM4Q6P4Q7 775 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 SV2BQ7L1I2 683 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 NEK8Q86SG6 692 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
USH1C-201ENST00000005226 BAP1Q92560 729 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 STIM2Q9P246 746 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 NFU1Q9UMS0 254 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 HYOU1Q9Y4L1 999 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 GNAQP50148 359 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 FIGNQ5HY92 759 aa15.55■□□□□ 0.08
USH1C-201ENST00000005226 CACNA2D4Q7Z3S7 1137 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms