RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Fam49aQ8BHZ0 323 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Scn7aB1AYL1 1681 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Otud7bB2RUR8 840 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm10378F6XQQ1 160 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Tmod1P49813 359 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Rnf187Q8BFX1 236 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cst12Q9DAN8 128 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krt28A6BLY7 462 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Serpinc1P32261 465 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Mcm5P49718 733 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gdf10P97737 476 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ece2Q80Z60 881 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Arrdc4A0A0B4J1F4 415 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 ItpripQ3TNL8 555 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm3414Q3TNU4 584 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ckap2Q3V1H1 664 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Specc1Q5SXY1 1067 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Fkbp3Q62446 224 aaKnown RBP16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ncapg2Q6DFV1 1138 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ankfy1Q810B6 1169 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Lmntd2Q0VET5 664 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Clca4aQ6Q473 924 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Slc17a8Q8BFU8 601 aa16.96■□□□□ 0.31
Upf1-202ENSMUST00000215817 Spata31d1bE9QA57 1361 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Surf1P09925 306 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Ano6Q6P9J9 911 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Etnk1Q9D4V0 363 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Zmynd8A2A484 1235 aaKnown RBP16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Rgs9O54828 675 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Dhx37Q6NZL1 1150 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Sdccag8Q80UF4 717 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Epha10Q8BYG9 1007 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Syce1Q9D495 329 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Kndc1Q0KK55 1742 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Rnf207Q3V3A7 635 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Gzf1Q4VBD9 706 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Abcf1Q6P542 837 aaKnown RBP16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Fam122aQ9DB52 284 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Zscan25B2RX31 543 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Rbp3P49194 1234 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 CebpzP53569 1052 aaKnown RBP16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Sec23aQ01405 765 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Vat1lQ80TB8 417 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Cep85Q8BMK0 761 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mx2Q9WVP9 655 aa16.95■□□□□ 0.3
Upf1-202ENSMUST00000215817 Cdh15P33146 784 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Rps6P62754 249 aaKnown RBP16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Tdrd1Q99MV1 1172 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Celf5D3Z4T1 395 aaKnown RBP16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Kcna1P16388 495 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Zdhhc9P59268 364 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Myo1hQ9D6A1 958 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 XdhQ00519 1335 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Zfp251Q6PCX8 632 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Crybg3Q80W49 1005 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Csgalnact2Q8C1F4 542 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Oxnad1Q8VE38 311 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Pcdhb15Q91Y04 786 aa16.94■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mmp10O55123 476 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mtx1P47802 317 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mars2Q499X9 586 aaKnown RBP16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 FcgrtQ61559 365 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Ctnna3Q65CL1 895 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Ccdc169Q8BXX9 214 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Paxbp1P58501 919 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Cfap157Q0VFX2 523 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Q8BZJ8 459 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Stard7Q8R1R3 373 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Trim59Q922Y2 403 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Tpd52l2Q9CYZ2 220 aaKnown RBP16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Eif2ak1Q9Z2R9 619 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 EvplQ9D952 2035 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Fam89aQ14BJ1 175 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Klhdc9Q3USL1 350 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Heg1E9Q7X6 1337 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Ap1b1O35643 943 aaKnown RBP16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Acot10Q32MW3 439 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Grpel1Q99LP6 217 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Sucla2Q9Z2I9 463 aa16.93■□□□□ 0.3
Upf1-202ENSMUST00000215817 Myh1Q5SX40 1942 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Tnni3kQ5GIG6 834 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Lin9Q8C735 542 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Scyl2Q8CFE4 930 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mettl7bQ9DD20 244 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Trpc3Q9QZC1 836 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Prpf40aQ9R1C7 953 aaKnown RBP16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Mtmr7Q9Z2C9 660 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Zkscan4Q5SZT6 480 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Atg4cQ811C2 458 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Tjp3Q9QXY1 905 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Bnip3lQ9Z2F7 218 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Cacna1sQ02789 1880 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Kiaa1841Q68FF0 718 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Olfr832Q7TRG9 312 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Pcdha12Q91Y18 950 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Capn12Q9ER56 720 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Disp2Q8CIP5 1345 aa16.92■□□□□ 0.3
Upf1-202ENSMUST00000215817 Kiaa1468Q148V7 1216 aa16.91■□□□□ 0.3
Upf1-202ENSMUST00000215817 Cep112Q5PR68 954 aa16.91■□□□□ 0.3
Upf1-202ENSMUST00000215817 Grm4Q68EF4 912 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms