RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Zdbf2Q5SS00 2493 aaKnown RBP25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Parp2O88554 559 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Itgb7P26011 806 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Meis2P97367 477 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Slc7a1Q09143 622 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Eepd1Q3TGW2 569 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ano10Q8BH79 659 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Yars2Q8BYL4 472 aaKnown RBP25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Rhobtb2Q91V93 728 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Polr2dQ9D7M8 142 aaKnown RBP25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nr2e3Q9QXZ7 395 aa25.56■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Gm43738A0A0G2JEA5 862 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Atp2b1G5E829 1220 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Anp32cQ64G17 123 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Luc7l2Q7TNC4 392 aaKnown RBP25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Sox30Q8CGW4 782 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Bhmt2Q91WS4 363 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Vps16Q920Q4 839 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Cul5Q9D5V5 780 aa25.55■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ppp1r1bQ60829 194 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Pdcl2Q78Y63 240 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nap1l4Q78ZA7 375 aaKnown RBP25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ccdc172Q810N9 267 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Dlk2Q8K1E3 382 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 RnpepQ8VCT3 650 aaKnown RBP25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Kri1Q8VDQ9 704 aaKnown RBP25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Ppp2r5dQ91V89 594 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 LpxnQ99N69 386 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Serpinb3bQ9D1Q5 387 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 MsraQ9D6Y7 233 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Znhit2Q9QY66 399 aa25.54■■□□□ 1.68
Scn1b-201ENSMUST00000098548 PfasQ5SUR0 1337 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Pdlim7Q3TJD7 457 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Hvcn1Q3U2S8 269 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Prl2c1Q5SVL9 228 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Cnga2Q62398 664 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Tmem60Q8K174 133 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 RragcQ99K70 398 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Arl6ip4Q9JM93 229 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Dctpp1Q9QY93 170 aa25.53■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Brd9Q3UQU0 596 aaKnown RBP25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Tnni3kQ5GIG6 834 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Cep128Q8BI22 1102 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Larp6Q8BN59 492 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Pde5aQ8CG03 865 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Trim32Q8CH72 655 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Zgrf1Q0VGT4 1863 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Gucy1a2F8VQK3 730 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Hmgcs2P54869 508 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Rps6P62754 249 aaKnown RBP25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Nt5c2Q3V1L4 560 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Eif3j2Q66JS6 263 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Cep85Q8BMK0 761 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Stard7Q8R1R3 373 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Havcr2Q8VIM0 281 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Apobec3Q99J72 440 aaKnown RBP25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Fem1bQ9Z2G0 627 aa25.52■■□□□ 1.68
Scn1b-201ENSMUST00000098548 Tmigd3G3X8R9 209 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Cdh15P33146 784 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Pex1Q5BL07 1284 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Madcam1Q61826 405 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Acat1Q8QZT1 424 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Slc12a8Q8VI23 705 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Kctd10Q922M3 315 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Alpk1Q9CXB8 1231 aa25.51■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Trim5E9PV98 497 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Zc3h7bF8VPP8 982 aaKnown RBP25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Il6stQ00560 917 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Neurl1bQ0MW30 546 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Cnnm4Q69ZF7 771 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ccdc189Q6NZQ0 333 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Podxl2Q8CAE9 603 aa25.5■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Rabgap1A2AWA9 1064 aa25.49■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Grin1P35438 938 aa25.49■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ecm1Q61508 559 aa25.49■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Hsdl1Q8BTX9 330 aa25.49■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Gm7356A0A087WSA6 508 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Fyb2A2A995 729 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Wnt7aP24383 349 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Lig1P37913 916 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Dhx40Q6PE54 779 aaKnown RBP25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ces1Q8VCC2 565 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Filip1Q9CS72 1211 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Krt18P05784 423 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Rnf157Q3TEL6 685 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Igf2bp2Q5SF07 592 aaKnown RBP25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Fermt2Q8CIB5 680 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Scrn1Q9CZC8 414 aa25.48■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Serpina16D3Z660 418 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 C87499Q3UX49 493 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Specc1Q5SXY1 1067 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ctdspl2Q8BG15 465 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Ints4Q8CIM8 964 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Golph3lQ8R088 285 aaKnown RBP25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Arpp21Q9DCB4 807 aa25.47■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Brpf3B2KF05 1204 aaKnown RBP25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Bin1O08539 588 aaKnown RBP25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 SpibO35906 267 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Sdc2P43407 202 aa25.46■■□□□ 1.67
Scn1b-201ENSMUST00000098548 Adamts10P58459 1104 aa25.46■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms