RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 NfkbibQ60778 359 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Hdac4Q6NZM9 1076 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mterf4Q8BVN4 346 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Nip7Q9CXK8 180 aaKnown RBP11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rfwd2Q9R1A8 733 aaKnown RBP11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 DexiQ9WUQ7 95 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Kif9Q9WV04 790 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Card9A2AIV8 536 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gm7995L7N2E4 160 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Art2bO35975 289 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Scp2P32020 547 aaKnown RBP11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rasgrf2P70392 1189 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Atp8a2P98200 1148 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gsdmc4Q3TR54 480 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 MbipQ99LQ1 341 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Galnt15Q9D2N8 638 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lamc1P02468 1607 aaKnown RBP11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 1700018F24RikB2RW27 314 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zfp839E9PUU5 921 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zfp212G3X8R7 492 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lipo1J3QME6 396 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Skap1Q3UUV5 355 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pls1Q3V0K9 630 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zbtb17Q60821 794 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Arhgap10Q6Y5D8 786 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tor4aQ8BH02 426 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 ZgpatQ8VDM1 511 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Creb3l3Q91XE9 479 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Thap2Q9D305 217 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ndst4Q9EQW8 872 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Adrm1Q9JKV1 407 aa11.13□□□□□ -0.63
Lig4-201ENSMUST00000095476 Abcc2Q8VI47 1543 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Scgb2b18A0A087WPA9 112 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rsrc2A2RTL5 376 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Apol6B7ZC55 329 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 G3bp2P97379 482 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tmprss11aQ3UQ41 389 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Arhgap44Q5SSM3 814 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Leng8Q8CBY3 785 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Myl6bQ8CI43 207 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ccdc92Q8VDN4 314 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lzts2Q91YU6 671 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 IkbipQ9DBZ1 373 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 ErmardE9Q048 622 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Micall2Q3TN34 1009 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rnpc3Q3UZ01 514 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 ItgadQ3V0T4 1168 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ankzf1Q80UU1 748 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc39a6Q8C145 765 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rbm43Q99J64 343 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Homer2Q9QWW1 354 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Large1Q9Z1M7 756 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cfap221A9Q751 836 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ugt1a6bK9J7B2 531 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pgrmc1O55022 195 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Drp2Q05AA6 957 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Trim71Q1PSW8 855 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ugt1a6Q64435 531 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ugt1a7cQ6ZQM8 531 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ttc26Q8BS45 554 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gpr108Q91WD0 569 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lrp2bpQ9D4C6 346 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ndufa13Q9ERS2 144 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pdzd4Q9QY39 772 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zranb2Q9R020 330 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Fmn2Q9JL04 1578 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Krt13P08730 437 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Prl3d1P18121 224 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rnf216P58283 853 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Hddc2Q3SXD3 199 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 GartQ64737 1010 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 HltfQ6PCN7 1003 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Krt75Q8BGZ7 551 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Q8C5C9 218 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Proser2Q8C5R2 471 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ino80bQ99PT3 375 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 IydQ9DCX8 285 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Trp53inp1Q9QXE4 239 aa11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Orc1Q9Z1N2 840 aaKnown RBP11.12□□□□□ -0.63
Lig4-201ENSMUST00000095476 Kif6E9PX57 802 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zfp651E9PZ11 729 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rnf10Q3UIW5 804 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dpf2Q61103 391 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 GzmnQ920S1 248 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Alg1Q921Q3 482 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Scrn1Q9CZC8 414 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lonrf3Q9D4H7 753 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 FibpQ9JI19 357 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zfp94E9Q6Y4 486 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Xrcc5P27641 732 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dab2ipQ3UHC7 1189 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pnma5Q5DTT8 618 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cog5Q8C0L8 829 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tldc1Q8K0P3 455 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Nek3Q9R0A5 511 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 InsrrQ9WTL4 1300 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Uhrf1bp1lA2RSJ4 1457 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mmrn2A6H6E2 943 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Psmd14O35593 310 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Myl1P05977 188 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms