RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Acat3Q80X81 397 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Klhl24Q8BRG6 600 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Svs3bQ8BZH8 265 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cdc37l1Q9CZP7 335 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ercc4Q9QZD4 917 aa9.77□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ccdc13D3YV10 709 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Enc1O35709 589 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc1a2P43006 572 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Casc3Q8K3W3 698 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 MtpapQ9D0D3 585 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm13941A2AJ38 245 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Phldb3E9QAF4 648 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cacna2d4Q5RJF7 1116 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Camk2dQ6PHZ2 499 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 TbcelQ8C5W3 424 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gspt1Q8R050 636 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kif17Q99PW8 1038 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ndufv2Q9D6J6 248 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 ParvbQ9ES46 365 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 MefvQ9JJ26 767 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sdccag3A2AIW0 432 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm3755K7N743 167 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm3033M0QWI0 180 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm3532M0QWL4 194 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cfdp1O88271 295 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 AlbP07724 608 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 PpargP37238 505 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Fosl2P47930 326 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rin3P59729 980 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 UnklQ5FWH2 727 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Il17raQ60943 864 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tmx1Q8VBT0 278 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Spats2lQ91WJ7 558 aaKnown RBP9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ift22Q9DAI2 185 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ecel1Q9JMI0 775 aa9.77□□□□□ -0.85
Clcn3-202ENSMUST00000056508 NischQ80TM9 1593 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 1700024B05RikE9Q6D7 167 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm10378F6XQQ1 160 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm7995L7N2E4 160 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Scg3P47867 471 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cnga4Q3UW12 575 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Utp14bQ6EJB6 756 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mapre3Q6PER3 281 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 GptQ8QZR5 496 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Haus2Q9CQS9 234 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Q9D4A5 307 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Fxr2Q9WVR4 673 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Deaf1Q9Z1T5 566 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ptrhd1D3Z4S3 140 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Serpina3cP29621 417 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Yap1P46938 488 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc12a2P55012 1205 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Alkbh5Q3TSG4 395 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ddx3xQ62167 662 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Foxp3Q99JB6 429 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rprd1bQ9CSU0 326 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Dsn1Q9CYC5 348 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Haus5Q9D786 619 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Evi5P97366 809 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Specc1lQ2KN98 1118 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ccdc66Q6NS45 935 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Tmc8Q7TN58 722 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc7a6osQ7TPE5 306 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Dpp8Q80YA7 892 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Pomgnt2Q8BW41 605 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ddx18Q8K363 660 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Trem2Q99NH8 227 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm14692A2BH01 229 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kcna5Q61762 602 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kank4Q6P9J5 1016 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Cspg5Q71M36 566 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Galnt7Q80VA0 657 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gpr89aQ8BS95 455 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Snx4Q91YJ2 450 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Znf287Q9EQB9 759 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 D17h6s53eQ9Z1R4 293 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mtg2A2AFK4 405 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mmrn2A6H6E2 943 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Slc4a4O88343 1079 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Dync1i2O88487 612 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Sipa1P46062 1037 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Rasip1Q3U0S6 961 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ppp1r14bQ62084 147 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Vamp1Q62442 118 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Acot4Q8BWN8 421 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 HnrnpuQ8VEK3 800 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Hdac11Q91WA3 347 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 SelenosQ9BCZ4 190 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ola1Q9CZ30 396 aaKnown RBP9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Actn2Q9JI91 894 aa9.76□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Mmrn1B2RPV6 1210 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Zbtb7aO88939 569 aaKnown RBP9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Ric8aQ3TIR3 530 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Pfdn4Q3UWL8 134 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gm1527Q3V0P3 650 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Kmt5cQ6Q783 468 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Samd3Q8C4H2 520 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Fam228aQ8CDW1 299 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Gle1Q8R322 699 aa9.75□□□□□ -0.85
Clcn3-202ENSMUST00000056508 Spon1Q8VCC9 807 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms