RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Lmbrd1Q8K0B2 537 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Zkscan3Q91VW9 553 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Prpf6Q91YR7 941 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Kif17Q99PW8 1038 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Tmem192Q9CXT7 266 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Fam173bQ9D1Z3 247 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Fsip1Q9D3V5 435 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Tjp1P39447 1745 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Rimbp3Q3V0F0 1606 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Znf638Q61464 1960 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Znf609Q8BZ47 1413 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Mroh9G5E8L9 891 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Eftud2O08810 971 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 XlrP05531 208 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Rps6ka1P18653 724 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Serpinc1P32261 465 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Rps8P62242 208 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Scg2Q03517 617 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Spg7Q3ULF4 781 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Kctd19Q562E2 927 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Sh3gl1Q62419 368 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Anks6Q6GQX6 883 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Krt42Q6IFX2 452 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 LRWD1Q8BUI3 648 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Tmx4Q8C0L0 335 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Golph3Q9CRA5 298 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Ttc13A0A1L1SSC7 844 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Nme9A0A1L1SUL6 329 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Zfp408H7BX78 710 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Men1O88559 611 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Ctnna1P26231 906 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Ap1m1P35585 423 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Trip13Q3UA06 432 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Lsm14bQ8CGC4 385 aaKnown RBP11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Plagl2Q925T4 496 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Arl6ip4Q9JM93 229 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 GsdmeQ9Z2D3 512 aa11.4□□□□□ -0.58
Trim17-201ENSMUST00000047697 Prl2c2P04095 224 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Art2aP17981 287 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tal1P22091 329 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Eya3P97480 510 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Specc1Q5SXY1 1067 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 KaznQ69ZS8 779 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Naa35Q6PHQ8 725 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tlr13Q6R5N8 991 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Bola2Q8BGS2 86 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Atp6v0a4Q920R6 833 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ddx47Q9CWX9 455 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Saal1Q9D2C2 474 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Prl2c5Q9JLV9 222 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Zfp174B9EJW5 407 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 AdkP55264 361 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ddb1Q3U1J4 1140 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Pls1Q3V0K9 630 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Prpf38aQ4FK66 312 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Eme2Q56A04 373 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Q8BWG4 1187 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 AopepQ8BXQ6 817 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Parp10Q8CIE4 960 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Olfr805Q8VFI4 319 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Mmtag2Q99LX5 260 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 4931408C20RikE9PWP9 1381 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Myh6Q02566 1938 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Pcdh11xF6ZNL5 1338 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Folh1O35409 752 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Alppl2P24823 529 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 PltpP55065 493 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Slc30a9Q5IRJ6 567 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Dhx37Q6NZL1 1150 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Fnbp1Q80TY0 616 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Bsdc1Q80Y55 427 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Mmgt1Q8K273 131 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Smc6Q924W5 1097 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Abcf2Q99LE6 628 aaKnown RBP11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Hsd3b7Q9EQC1 369 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tmem47Q9JJG6 181 aa11.39□□□□□ -0.59
Trim17-201ENSMUST00000047697 Adamtsl3G3UXC7 1706 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Fkbp1aP26883 108 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ank1Q02357 1862 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Sox13Q04891 613 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Emc10Q3TAS6 258 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gm5592Q3V0A6 857 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gm5935Q497S0 212 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Mindy1Q76LS9 468 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Csgalnact2Q8C1F4 542 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Alpk1Q9CXB8 1231 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Galnt15Q9D2N8 638 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 NapaQ9DB05 295 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 IkQ9Z1M8 557 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Vmn2r71L7N2D8 855 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Il27raO70394 623 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tmod1P49813 359 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Nlrx1Q3TL44 975 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Rnpc3Q3UZ01 514 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Rhpn1Q61085 643 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Phf8Q80TJ7 1023 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Dhx58Q99J87 678 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Acsl3Q9CZW4 720 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Akr1b10G5E895 316 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ncf2O70145 525 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms