RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rps6P62754 249 aaKnown RBP9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ankrd13cQ3UX43 541 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Grik5Q61626 979 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cnnm4Q69ZF7 771 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Q8BZJ8 459 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ttc27Q8CD92 847 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fbxo18Q8K2I9 1042 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Kbtbd4Q8R179 534 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Rhobtb2Q91V93 728 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Arhgef25Q9CWR0 618 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fsip1Q9D3V5 435 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Usp34Q6ZQ93 3582 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Dnajc25A2ALW5 357 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gm4758L7N258 96 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 MyocO70624 490 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Pcdha4O88689 947 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mcm6P97311 821 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Arl14Q3SXC5 192 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Txndc16Q7TN22 820 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 E2f4Q8R0K9 410 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Slc12a8Q8VI23 705 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tmod4Q9JLH8 345 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tal1P22091 329 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Dhx40Q6PE54 779 aaKnown RBP9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tmem132dQ76HP3 1097 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Atg4cQ811C2 458 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Syne4Q8CII8 388 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tesk2Q8VCT9 570 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Q91WD4 421 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Brms1Q99N20 246 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Phf14Q9D4H9 881 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tfr2Q9JKX3 798 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fem1bQ9Z2G0 627 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ulk4Q3V129 1303 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Oip5A2AQ14 241 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Serpina16D3Z660 418 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mroh8E9PYI4 1049 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gm5624F6ZZG8 207 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Sox10Q04888 466 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc162pQ0VG85 912 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 OsbpQ3B7Z2 805 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Psg29Q3URN6 468 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Asic1Q6NXK8 526 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc122Q8BVN0 290 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ero1bQ8R2E9 467 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cacnb1Q8R3Z5 597 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Kri1Q8VDQ9 704 aaKnown RBP9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Arl6ip4Q9JM93 229 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 Syt10Q9R0N4 523 aa9.78□□□□□ -0.84
Trim39-201ENSMUST00000042717 ArP19091 899 aa9.77□□□□□ -0.84
Trim39-201ENSMUST00000042717 PpardP35396 440 aa9.77□□□□□ -0.84
Trim39-201ENSMUST00000042717 Rnf180Q3U827 592 aa9.77□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ifih1Q8R5F7 1025 aa9.77□□□□□ -0.84
Trim39-201ENSMUST00000042717 Magi2Q9WVQ1 1275 aa9.77□□□□□ -0.84
Trim39-201ENSMUST00000042717 Scn10aQ6QIY3 1958 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Hoxc10P31257 342 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Setd4P58467 439 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Map4k1P70218 827 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rbm46P86049 533 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Olfm4Q3UZZ4 505 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pla2g4eQ50L42 875 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 CtcfQ61164 736 aaKnown RBP9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 RubcnQ80U62 956 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ddx19bQ8BZY3 494 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Anapc4Q91W96 807 aa9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pabpc6Q9D4E6 643 aaKnown RBP9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Celf2Q9Z0H4 508 aaKnown RBP9.77□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cdc25aP48964 514 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gtpbp6Q3U6U5 514 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Tbc1d30Q69ZT9 766 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Il31raQ8K5B1 716 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Havcr2Q8VIM0 281 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Vta1Q9CR26 309 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Chaf1aQ9QWF0 911 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Fxr2Q9WVR4 673 aaKnown RBP9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Eif2ak1Q9Z2R9 619 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Grin2dQ03391 1323 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Esr2O08537 530 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Mpp3O88910 568 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Traf5P70191 558 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Slc7a1Q09143 622 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Fam83hQ148V8 1209 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Mettl14Q3UIK4 456 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Usp13Q5BKP2 858 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gas7Q60780 421 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 BcrQ6PAJ1 1270 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nap1l4Q78ZA7 375 aaKnown RBP9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Tsen34Q8BMZ5 316 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Fermt2Q8CIB5 680 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Krt79Q8VED5 531 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Josd2Q9CR30 188 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 SerhlQ9EPB5 311 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Hmgn5Q9JL35 406 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pkd2l2Q9JLG4 621 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 A0A1L1SQF0 893 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 LtkP08923 888 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Eps15P42567 897 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Tdo2P48776 406 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Atoh1P48985 351 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Trim47Q8C0E3 641 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms