RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Lrrc59Q922Q8 307 aaKnown RBP20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ehd4Q9EQP2 541 aa20.15■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ca8P28651 291 aa20.14■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cep85Q8BMK0 761 aa20.14■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ppp2r5dQ91V89 594 aa20.14■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Tpcn1Q9EQJ0 817 aa20.14■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Calb1P12658 261 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 RpsaP14206 295 aaKnown RBP20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Skap2Q3UND0 358 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tlcd1Q99JT6 247 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Scyl1Q9EQC5 806 aaKnown RBP20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tmem87aQ8BXN9 555 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Iws1Q8C1D8 766 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 BaatQ91X34 420 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Q922C1 641 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Gfpt2Q9Z2Z9 682 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Gtpbp10Q8K013 366 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Taco1Q8K0Z7 294 aaKnown RBP20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ccdc182Q9D9C6 152 aa20.14■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Gna14P30677 355 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Pla2g4aP47713 748 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Hps5P59438 1126 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Myo1fP70248 1099 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ccdc15Q8C9M2 810 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Appl2Q8K3G9 662 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 CoasyQ9DBL7 563 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Snx1Q9WV80 522 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Abca16E9PWJ7 1678 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Synj2Q9D2G5 1434 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Pcdha4O88689 947 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 PrphP15331 475 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Git1Q68FF6 770 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Acad11Q80XL6 779 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Sptlc3Q8BG54 563 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Cgref1Q8R1U2 281 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Actn2Q9JI91 894 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ccne2Q9Z238 404 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Lcmt1A0A0U1RNF2 332 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Slc39a2G3X943 309 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Carmil2Q3V3V9 1296 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Slc9a2Q3ZAS0 814 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ppp1r13bQ62415 1087 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Clasp2Q8BRT1 1286 aaKnown RBP20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 IdeQ9JHR7 1019 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Cfap70D3YVL2 1141 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Luc7l3Q5SUF2 432 aaKnown RBP20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ccdc169Q8BXX9 214 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Mylk2Q8VCR8 613 aa20.13■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Exosc10P56960 887 aaKnown RBP20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Cyp4x1Q6A152 507 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Pm20d1Q8C165 503 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tpp1O89023 562 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ephb4P54761 987 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ddx19bQ8BZY3 494 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tmem63cQ8CBX0 802 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ttc13A0A1L1SSC7 844 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Stk10O55098 966 aa20.12■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ccdc175E9PVB3 822 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Speer4f2E9Q366 295 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 PhbP67778 272 aaKnown RBP20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Sec31aQ3UPL0 1230 aaKnown RBP20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tbc1d1Q60949 1255 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Slc9a1Q61165 820 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Prr18Q6PAN7 307 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ttc26Q8BS45 554 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tex21Q9R0U9 575 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Stk11Q9WTK7 436 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Serpini1O35684 410 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Krt34Q9D646 392 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Sdr42e1Q9D665 394 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Carmil3Q3UFQ8 1375 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ulbp1Q8HWA3 334 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Spdl1Q923A2 608 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Psmd6Q99JI4 389 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Kif23E9Q5G3 953 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 GabrdP22933 449 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Traf1P39428 409 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Trim37Q6PCX9 961 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 CgasQ8C6L5 507 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 MgarpQ8VI64 283 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tpd52l2Q9CYZ2 220 aaKnown RBP20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Cul1Q9WTX6 776 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Setd1aE9PYH6 1716 aa20.11■□□□□ 0.81
Ebf3-201ENSMUST00000033378 A0A286YCQ6 122 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Dab2P98078 766 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Esyt2Q3TZZ7 845 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Rbm15bQ6PHZ5 887 aaKnown RBP20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Fbxo11Q7TPD1 930 aaKnown RBP20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Ces1dQ8VCT4 565 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 MypnQ5DTJ9 1315 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Stat4P42228 749 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Trim43aQ3TL54 445 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 HmcesQ8R1M0 353 aaKnown RBP20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Cfap221A9Q751 836 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Dynll2Q9D0M5 89 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Adarb2Q9JI20 745 aa20.1■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Mmrn1B2RPV6 1210 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Mroh8E9PYI4 1049 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tsen34Q8BMZ5 316 aa20.09■□□□□ 0.81
Ebf3-201ENSMUST00000033378 Tc2nQ91XT6 489 aa20.09■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms