RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc12a2P55012 1205 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Ssrp1Q08943 708 aaKnown RBP18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 D130040H23RikQ8BII3 405 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Txnrd3Q99MD6 652 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Pkd2l2Q9JLG4 621 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Nme9A0A1L1SUL6 329 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Fam186bD3Z420 943 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Atp6v0a2P15920 856 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Alpk1Q9CXB8 1231 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 TbcbQ9D1E6 244 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Vmn2r68L7N2B3 851 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Folh1O35409 752 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Slc9a2Q3ZAS0 814 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 PnocQ64387 187 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Fam173bQ9D1Z3 247 aa18.23■□□□□ 0.51
Shh-201ENSMUST00000002708 Chrna9G3X8Z7 479 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Sdad1Q80UZ2 687 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Lrsam1Q80ZI6 727 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Arhgef19Q8BWA8 802 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Stap2Q8R0L1 411 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 PpanQ91YU8 470 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Nol4P60954 483 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 EgfrQ01279 1210 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 MyrflQ3UN70 904 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Lrrc55Q3UY51 311 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Shc3Q61120 474 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Dpp8Q80YA7 892 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Nop9Q8BMC4 636 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Tor1aip1Q921T2 595 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Ccdc43Q9CR29 222 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Gm45208A0A140LJ36 292 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Rasa2P58069 847 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Eef2P58252 858 aaKnown RBP18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Lca5Q80ST9 704 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Cdan1Q8CC12 1239 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Lrrc41Q8K1C9 807 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 VillQ91YD6 859 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Fsip1Q9D3V5 435 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 CenphQ9QYM8 241 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 Peg12Q9WVA7 283 aa18.22■□□□□ 0.51
Shh-201ENSMUST00000002708 VirmaA2AIV2 1811 aaKnown RBP18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Mx1P09922 631 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Actn4P57780 912 aaKnown RBP18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Gcnt1Q09324 428 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Oxr1Q4KMM3 866 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Glra4Q61603 456 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 BcrQ6PAJ1 1270 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Mindy1Q76LS9 468 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Eif3cQ8R1B4 911 aaKnown RBP18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 1700003F12RikA2AKE5 210 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Sec24cG3X972 1096 aaKnown RBP18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 GalcP54818 684 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 GscQ02591 256 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Psg29Q3URN6 468 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Kcnj11Q61743 390 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Bbs9Q811G0 885 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Usp15Q8R5H1 981 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Eif4a3Q91VC3 411 aaKnown RBP18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Mtmr4Q91XS1 1190 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Ccdc83Q9D4V3 305 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Plcb1Q9Z1B3 1216 aa18.21■□□□□ 0.51
Shh-201ENSMUST00000002708 Tal1P22091 329 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Stim2P83093 746 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Gdf10P97737 476 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Tmed8Q3UHI4 326 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Ccdc42Q5SV66 316 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Fkbp3Q62446 224 aaKnown RBP18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Cep70Q6IQY5 616 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Clca4aQ6Q473 924 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Adcy2Q80TL1 1090 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Parp10Q8CIE4 960 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Tut1Q8R3F9 869 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Kctd10Q922M3 315 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 NpcdF8VQB8 469 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Krt42Q6IFX2 452 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Rnf187Q8BFX1 236 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Pcdhb5Q91XZ5 792 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 GzmnQ920S1 248 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Mtcl1Q3UHU5 1945 aa18.2■□□□□ 0.5
Shh-201ENSMUST00000002708 Zfp831A2ADM8 1628 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 C2cd2E9Q3C1 696 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Lrrc32G3XA59 663 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Men1O88559 611 aaKnown RBP18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Tubb4bP68372 445 aaKnown RBP18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Kdm7aQ3UWM4 940 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 1810065E05RikQ5NC41 235 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 EregQ61521 162 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 RragaQ80X95 313 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Cracr2bQ80ZJ8 394 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Nfu1Q9QZ23 255 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Gm5114W4VSN8 858 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Apol6B7ZC55 329 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Nf2P46662 596 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Sap30bpQ02614 308 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Ttbk2Q3UVR3 1243 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Kctd19Q562E2 927 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Klra4Q60651 263 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Vipas39Q8BGQ1 491 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Mettl5Q8K1A0 209 aa18.19■□□□□ 0.5
Shh-201ENSMUST00000002708 Efhd1Q9D4J1 240 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms