RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 TY1A-BRQ12217 440 aa4.66□□□□□ -1.66
snR60snR60 TY1A-NL2Q12470 440 aa4.66□□□□□ -1.66
snR60snR60 TY1A-GR2Q12485 440 aa4.66□□□□□ -1.66
snR60snR60 SEC2P17065 759 aa4.65□□□□□ -1.67
snR60snR60 CKB1P43639 278 aa4.65□□□□□ -1.67
snR60snR60 NPL4P33755 580 aa4.63□□□□□ -1.67
snR60snR60 YPR109WQ06104 294 aa4.63□□□□□ -1.67
snR60snR60 ERG12P07277 443 aa4.62□□□□□ -1.67
snR60snR60 PSE1P32337 1089 aaKnown RBP4.61□□□□□ -1.67
snR60snR60 GCD11P32481 527 aaKnown RBP4.61□□□□□ -1.67
snR60snR60 CST6P40535 587 aa4.61□□□□□ -1.67
snR60snR60 LAM6Q08001 693 aa4.61□□□□□ -1.67
snR60snR60 PBS2P08018 668 aa4.6□□□□□ -1.67
snR60snR60 SPT16P32558 1035 aaKnown RBP4.59□□□□□ -1.67
snR60snR60 SAS10Q12136 610 aaPredicted RBP4.59□□□□□ -1.67
snR60snR60 DSF2P38213 736 aa4.57□□□□□ -1.68
snR60snR60 PAT1P25644 796 aaKnown RBP4.56□□□□□ -1.68
snR60snR60 CLB5P30283 435 aa4.56□□□□□ -1.68
snR60snR60 AIR1P40507 360 aaKnown RBP4.56□□□□□ -1.68
snR60snR60 RRN7P40992 514 aa4.56□□□□□ -1.68
snR60snR60 CLA4P48562 842 aa4.56□□□□□ -1.68
snR60snR60 ERF2Q06551 359 aa4.56□□□□□ -1.68
snR60snR60 MOD5P07884 428 aa4.55□□□□□ -1.68
snR60snR60 KEX2P13134 814 aa4.55□□□□□ -1.68
snR60snR60 CDC4P07834 779 aa4.54□□□□□ -1.68
snR60snR60 BRE2P43132 505 aa4.54□□□□□ -1.68
snR60snR60 BDP1P46678 594 aa4.54□□□□□ -1.68
snR60snR60 RTF1P53064 558 aa4.54□□□□□ -1.68
snR60snR60 HED1Q03937 162 aa4.54□□□□□ -1.68
snR60snR60 MAM3Q12296 706 aa4.54□□□□□ -1.68
snR60snR60 SIT4P20604 311 aa4.53□□□□□ -1.68
snR60snR60 AGE1Q04412 482 aa4.53□□□□□ -1.68
snR60snR60 NUP42P49686 430 aaKnown RBP4.52□□□□□ -1.69
snR60snR60 GCR2Q01722 534 aa4.52□□□□□ -1.69
snR60snR60 FRK1Q03002 865 aaPredicted RBP4.52□□□□□ -1.69
snR60snR60 PAC1P39946 494 aaKnown RBP4.51□□□□□ -1.69
snR60snR60 IES2P40154 320 aa4.5□□□□□ -1.69
snR60snR60 TUB4P53378 473 aa4.5□□□□□ -1.69
snR60snR60 YNL115CP53925 644 aa4.5□□□□□ -1.69
snR60snR60 TPD3P31383 635 aa4.48□□□□□ -1.69
snR60snR60 DMA1P38823 416 aa4.47□□□□□ -1.69
snR60snR60 TEA1P47988 759 aa4.47□□□□□ -1.69
snR60snR60 NIS1P53939 407 aa4.46□□□□□ -1.7
snR60snR60 MET32Q12041 191 aa4.46□□□□□ -1.7
snR60snR60 DIT2P21595 489 aa4.45□□□□□ -1.7
snR60snR60 AFT1P22149 690 aa4.45□□□□□ -1.7
snR60snR60 MET22P32179 357 aa4.45□□□□□ -1.7
snR60snR60 ENV9Q08651 330 aa4.45□□□□□ -1.7
snR60snR60 GAR1P28007 205 aaKnown RBP4.44□□□□□ -1.7
snR60snR60 ASH1P34233 588 aa4.43□□□□□ -1.7
snR60snR60 HXT10P43581 546 aa4.42□□□□□ -1.7
snR60snR60 KXD1P53158 218 aa4.42□□□□□ -1.7
snR60snR60 FPK1P53739 893 aa4.42□□□□□ -1.7
snR60snR60 PUS5Q06244 254 aa4.42□□□□□ -1.7
snR60snR60 PDC1P06169 563 aaKnown RBP4.41□□□□□ -1.7
snR60snR60 SPB4P25808 606 aaPredicted RBP4.41□□□□□ -1.7
snR60snR60 RRD1P40454 393 aaKnown RBP4.4□□□□□ -1.71
snR60snR60 HST2P53686 357 aa4.39□□□□□ -1.71
snR60snR60 HST3P53687 447 aa4.39□□□□□ -1.71
snR60snR60 YDR444WQ04093 687 aa4.39□□□□□ -1.71
snR60snR60 LCB5Q06147 687 aaKnown RBP4.39□□□□□ -1.71
snR60snR60 SLY41P22215 453 aa4.38□□□□□ -1.71
snR60snR60 GBP2P25555 427 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
snR60snR60 BUB1P41695 1021 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
snR60snR60 RPA14P50106 137 aa4.38□□□□□ -1.71
snR60snR60 PUS6P53294 404 aa4.38□□□□□ -1.71
snR60snR60 YPR097WQ06839 1073 aa4.38□□□□□ -1.71
snR60snR60 YJR115WP47152 169 aa4.37□□□□□ -1.71
snR60snR60 MSB3P48566 633 aaPredicted RBP4.37□□□□□ -1.71
snR60snR60 SYH1Q02875 849 aaKnown RBP4.37□□□□□ -1.71
snR60snR60 YDL176WQ12027 708 aa4.37□□□□□ -1.71
snR60snR60 YMR196WQ04336 1088 aa4.36□□□□□ -1.71
snR60snR60 MRT4P33201 236 aaKnown RBP4.35□□□□□ -1.71
snR60snR60 ALR1Q08269 859 aa4.35□□□□□ -1.71
snR60snR60 YDL206WQ12424 762 aa4.34□□□□□ -1.71
snR60snR60 TRM1P15565 570 aaKnown RBP4.33□□□□□ -1.72
snR60snR60 SCJ1P25303 377 aa4.33□□□□□ -1.72
snR60snR60 RTT106P40161 455 aa4.33□□□□□ -1.72
snR60snR60 YNR021WP53723 404 aaKnown RBP4.33□□□□□ -1.72
snR60snR60 MMP1Q12372 583 aa4.32□□□□□ -1.72
snR60snR60 GLN1P32288 370 aaKnown RBP4.31□□□□□ -1.72
snR60snR60 RSC30P38781 883 aa4.31□□□□□ -1.72
snR60snR60 ACO2P39533 789 aa4.31□□□□□ -1.72
snR60snR60 ATF2P53296 535 aa4.31□□□□□ -1.72
snR60snR60 TBF1Q02457 562 aa4.31□□□□□ -1.72
snR60snR60 PTK2P47116 818 aaKnown RBP4.3□□□□□ -1.72
snR60snR60 VAC17P25591 423 aa4.29□□□□□ -1.72
snR60snR60 UGA3P26370 528 aa4.29□□□□□ -1.72
snR60snR60 KIP2P28743 706 aa4.29□□□□□ -1.72
snR60snR60 IXR1P33417 597 aa4.29□□□□□ -1.72
snR60snR60 ESS1P22696 170 aa4.28□□□□□ -1.72
snR60snR60 NUP85P46673 744 aa4.28□□□□□ -1.72
snR60snR60 AIM7Q12156 149 aa4.28□□□□□ -1.72
snR60snR60 YJU3P28321 313 aa4.27□□□□□ -1.73
snR60snR60 GLC3P32775 704 aa4.27□□□□□ -1.73
snR60snR60 GLY1P37303 387 aaKnown RBP4.27□□□□□ -1.73
snR60snR60 OPT2Q06593 877 aa4.27□□□□□ -1.73
snR60snR60 KTR1P27810 393 aaKnown RBP4.26□□□□□ -1.73
snR60snR60 YLR346CQ06139 101 aa4.26□□□□□ -1.73
snR60snR60 YBL086CP38177 466 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms