RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W CKB1P43639 278 aa8.93□□□□□ -0.98
SMK1YPR054W ARH1P48360 493 aa8.93□□□□□ -0.98
SMK1YPR054W ESC1Q03661 1658 aaKnown RBP8.93□□□□□ -0.98
SMK1YPR054W YOR1P53049 1477 aa8.91□□□□□ -0.98
SMK1YPR054W PBS2P08018 668 aa8.91□□□□□ -0.98
SMK1YPR054W RAD54P32863 898 aa8.91□□□□□ -0.98
SMK1YPR054W SMC4Q12267 1418 aa8.9□□□□□ -0.98
SMK1YPR054W TAF7Q05021 590 aa8.9□□□□□ -0.98
SMK1YPR054W MLP2P40457 1679 aa8.9□□□□□ -0.98
SMK1YPR054W PDR10P51533 1564 aa8.9□□□□□ -0.99
SMK1YPR054W RKR1Q04781 1562 aa8.9□□□□□ -0.99
SMK1YPR054W SPB4P25808 606 aaPredicted RBP8.88□□□□□ -0.99
SMK1YPR054W BCK2P33306 851 aa8.88□□□□□ -0.99
SMK1YPR054W HAP5Q02516 242 aa8.88□□□□□ -0.99
SMK1YPR054W ITT1Q04638 464 aa8.88□□□□□ -0.99
SMK1YPR054W CDC73Q06697 393 aa8.88□□□□□ -0.99
SMK1YPR054W PAN1P32521 1480 aa8.88□□□□□ -0.99
SMK1YPR054W GEA2P39993 1459 aaKnown RBP8.88□□□□□ -0.99
SMK1YPR054W TY2B-LR1P0C2J3 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-FP0CX63 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-GR2P0CX64 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-CP25384 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-DR2Q03494 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY1B-DR1Q03855 1755 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-DR3Q07791 1770 aaKnown RBP8.87□□□□□ -0.99
SMK1YPR054W TY2B-OR1Q12113 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-DR1Q12472 1770 aa8.87□□□□□ -0.99
SMK1YPR054W TY2B-OR2Q12501 1770 aa8.87□□□□□ -0.99
SMK1YPR054W SNQ2P32568 1501 aaKnown RBP8.87□□□□□ -0.99
SMK1YPR054W NMA111P53920 997 aa8.87□□□□□ -0.99
SMK1YPR054W DPL1Q05567 589 aa8.87□□□□□ -0.99
SMK1YPR054W KIC1P38692 1080 aa8.86□□□□□ -0.99
SMK1YPR054W COX6P00427 148 aa8.85□□□□□ -0.99
SMK1YPR054W VRP1P37370 817 aa8.85□□□□□ -0.99
SMK1YPR054W RTT106P40161 455 aa8.85□□□□□ -0.99
SMK1YPR054W TY1B-BRQ12193 1756 aa8.85□□□□□ -0.99
SMK1YPR054W TY1B-GR3Q12316 1755 aa8.85□□□□□ -0.99
SMK1YPR054W TY1B-ORQ92393 1755 aa8.85□□□□□ -0.99
SMK1YPR054W TOP2P06786 1428 aaKnown RBP8.83□□□□□ -1
SMK1YPR054W SPT23P35210 1082 aa8.83□□□□□ -1
SMK1YPR054W TSC11P40061 1430 aa8.8□□□□□ -1
SMK1YPR054W SRB8P25648 1427 aa8.8□□□□□ -1
SMK1YPR054W GEA1P47102 1408 aaPredicted RBP8.8□□□□□ -1
SMK1YPR054W DSF2P38213 736 aa8.79□□□□□ -1
SMK1YPR054W MAK21Q12176 1025 aaKnown RBP8.79□□□□□ -1
SMK1YPR054W MMS1Q06211 1407 aa8.79□□□□□ -1
SMK1YPR054W PTC2P39966 464 aaKnown RBP8.78□□□□□ -1
SMK1YPR054W BNI4P53858 892 aa8.78□□□□□ -1
SMK1YPR054W TY1B-DR3Q99231 1755 aa8.78□□□□□ -1
SMK1YPR054W TY2B-BQ12491 1770 aa8.77□□□□□ -1.01
SMK1YPR054W MAM3Q12296 706 aa8.77□□□□□ -1.01
SMK1YPR054W YLR419WQ06698 1435 aaKnown RBP8.77□□□□□ -1.01
SMK1YPR054W PDR15Q04182 1529 aaKnown RBP8.76□□□□□ -1.01
SMK1YPR054W IES2P40154 320 aa8.76□□□□□ -1.01
SMK1YPR054W ISU2Q12056 156 aa8.76□□□□□ -1.01
SMK1YPR054W TY1B-HO13535 1793 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-DR5P0C2I2 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-DR6P0C2I3 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-LR2P0C2I5 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-LR3P0C2I6 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W TY1B-PR1P0C2I9 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W TY1B-PR2P0C2J0 1756 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-PR3P0C2J1 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W TY1B-JR1P47098 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-ML2Q03434 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W TY1B-ER1Q03612 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-ML1Q04711 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W TY1B-GR2Q12269 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-OLQ12273 1755 aa8.73□□□□□ -1.01
SMK1YPR054W TY1B-PLQ12414 1755 aaKnown RBP8.73□□□□□ -1.01
SMK1YPR054W PDR1P12383 1068 aa8.72□□□□□ -1.01
SMK1YPR054W IME2P32581 645 aa8.72□□□□□ -1.01
SMK1YPR054W ORC6P38826 435 aa8.72□□□□□ -1.01
SMK1YPR054W IRC20Q06554 1556 aa8.72□□□□□ -1.01
SMK1YPR054W RPP1BP10622 106 aaKnown RBP8.71□□□□□ -1.02
SMK1YPR054W CLC1P17891 233 aa8.71□□□□□ -1.02
SMK1YPR054W DRS2P39524 1355 aa8.71□□□□□ -1.02
SMK1YPR054W CFT1Q06632 1357 aaKnown RBP8.71□□□□□ -1.02
SMK1YPR054W DIT2P21595 489 aa8.69□□□□□ -1.02
SMK1YPR054W NUP42P49686 430 aaKnown RBP8.69□□□□□ -1.02
SMK1YPR054W YPR015CQ12531 247 aa8.69□□□□□ -1.02
SMK1YPR054W ULS1Q08562 1619 aa8.69□□□□□ -1.02
SMK1YPR054W LEU3P08638 886 aa8.68□□□□□ -1.02
SMK1YPR054W PEX21P50091 288 aa8.68□□□□□ -1.02
SMK1YPR054W NUP159P40477 1460 aa8.68□□□□□ -1.02
SMK1YPR054W GAP1P19145 602 aaPredicted RBP8.67□□□□□ -1.02
SMK1YPR054W XDJ1P39102 459 aa8.67□□□□□ -1.02
SMK1YPR054W YML082WQ04533 649 aaKnown RBP8.67□□□□□ -1.02
SMK1YPR054W TY3B-GQ99315 1547 aa8.67□□□□□ -1.02
SMK1YPR054W YRF1-1P0CX20 1796 aa8.66□□□□□ -1.02
SMK1YPR054W YRF1-5P0CX21 1796 aa8.66□□□□□ -1.02
SMK1YPR054W YRF1-8P0CX22 1796 aa8.66□□□□□ -1.02
SMK1YPR054W TCB2P48231 1178 aa8.66□□□□□ -1.02
SMK1YPR054W YRR1Q12172 810 aa8.66□□□□□ -1.02
SMK1YPR054W MHP1P43638 1398 aa8.65□□□□□ -1.02
SMK1YPR054W RAM1P22007 431 aa8.64□□□□□ -1.03
SMK1YPR054W OPY1P38271 328 aa8.64□□□□□ -1.03
SMK1YPR054W MVP1P40959 511 aaKnown RBP8.64□□□□□ -1.03
SMK1YPR054W VPS15P22219 1454 aa8.64□□□□□ -1.03
SMK1YPR054W RGR1P19263 1082 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms