RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A NUP42P49686 430 aaKnown RBP7.12□□□□□ -1.27
YOR343W-AYOR343W-A TY1A-DR1Q03856 440 aa7.12□□□□□ -1.27
YOR343W-AYOR343W-A TY1A-ML1Q04706 440 aaKnown RBP7.12□□□□□ -1.27
YOR343W-AYOR343W-A TY1A-BRQ12217 440 aa7.12□□□□□ -1.27
YOR343W-AYOR343W-A TY1A-NL2Q12470 440 aa7.12□□□□□ -1.27
YOR343W-AYOR343W-A TY1A-GR2Q12485 440 aa7.12□□□□□ -1.27
YOR343W-AYOR343W-A SEC2P17065 759 aa7.1□□□□□ -1.27
YOR343W-AYOR343W-A PRT1P06103 763 aaKnown RBP7.09□□□□□ -1.27
YOR343W-AYOR343W-A AMS1P22855 1083 aa7.07□□□□□ -1.28
YOR343W-AYOR343W-A RQC2Q12532 1038 aaKnown RBP7.07□□□□□ -1.28
YOR343W-AYOR343W-A DIT2P21595 489 aa7.04□□□□□ -1.28
YOR343W-AYOR343W-A ERF2Q06551 359 aa7.04□□□□□ -1.28
YOR343W-AYOR343W-A SPB4P25808 606 aaPredicted RBP7.03□□□□□ -1.28
YOR343W-AYOR343W-A NPL4P33755 580 aa7.03□□□□□ -1.28
YOR343W-AYOR343W-A GCD11P32481 527 aaKnown RBP7.02□□□□□ -1.28
YOR343W-AYOR343W-A KEX2P13134 814 aa7.01□□□□□ -1.29
YOR343W-AYOR343W-A CLB5P30283 435 aa7.01□□□□□ -1.29
YOR343W-AYOR343W-A MRF1P30775 413 aaPredicted RBP7□□□□□ -1.29
YOR343W-AYOR343W-A CST6P40535 587 aa6.99□□□□□ -1.29
YOR343W-AYOR343W-A YEL077CQ3E7X8 1277 aa6.99□□□□□ -1.29
YOR343W-AYOR343W-A SIT4P20604 311 aa6.97□□□□□ -1.29
YOR343W-AYOR343W-A RGA1P39083 1007 aa6.97□□□□□ -1.29
YOR343W-AYOR343W-A RRN7P40992 514 aa6.97□□□□□ -1.29
YOR343W-AYOR343W-A AGE1Q04412 482 aa6.97□□□□□ -1.29
YOR343W-AYOR343W-A TEA1P47988 759 aa6.95□□□□□ -1.3
YOR343W-AYOR343W-A NIS1P53939 407 aa6.95□□□□□ -1.3
YOR343W-AYOR343W-A LAM6Q08001 693 aa6.95□□□□□ -1.3
YOR343W-AYOR343W-A RTF1P53064 558 aa6.94□□□□□ -1.3
YOR343W-AYOR343W-A ERG12P07277 443 aa6.93□□□□□ -1.3
YOR343W-AYOR343W-A SPT16P32558 1035 aaKnown RBP6.93□□□□□ -1.3
YOR343W-AYOR343W-A PAC1P39946 494 aaKnown RBP6.93□□□□□ -1.3
YOR343W-AYOR343W-A CLA4P48562 842 aa6.91□□□□□ -1.3
YOR343W-AYOR343W-A TRK1P12685 1235 aa6.9□□□□□ -1.3
YOR343W-AYOR343W-A TUB4P53378 473 aa6.9□□□□□ -1.3
YOR343W-AYOR343W-A YNL115CP53925 644 aa6.9□□□□□ -1.3
YOR343W-AYOR343W-A MOD5P07884 428 aa6.89□□□□□ -1.31
YOR343W-AYOR343W-A BDP1P46678 594 aa6.89□□□□□ -1.31
YOR343W-AYOR343W-A YNR021WP53723 404 aaKnown RBP6.89□□□□□ -1.31
YOR343W-AYOR343W-A FPK1P53739 893 aa6.88□□□□□ -1.31
YOR343W-AYOR343W-A PAT1P25644 796 aaKnown RBP6.87□□□□□ -1.31
YOR343W-AYOR343W-A AIR1P40507 360 aaKnown RBP6.87□□□□□ -1.31
YOR343W-AYOR343W-A FRK1Q03002 865 aaPredicted RBP6.87□□□□□ -1.31
YOR343W-AYOR343W-A GLC3P32775 704 aa6.86□□□□□ -1.31
YOR343W-AYOR343W-A HST2P53686 357 aa6.82□□□□□ -1.32
YOR343W-AYOR343W-A SLY41P22215 453 aa6.8□□□□□ -1.32
YOR343W-AYOR343W-A SCJ1P25303 377 aa6.8□□□□□ -1.32
YOR343W-AYOR343W-A ATF2P53296 535 aa6.8□□□□□ -1.32
YOR343W-AYOR343W-A YMR196WQ04336 1088 aa6.8□□□□□ -1.32
YOR343W-AYOR343W-A CDC4P07834 779 aa6.78□□□□□ -1.32
YOR343W-AYOR343W-A HED1Q03937 162 aa6.78□□□□□ -1.32
YOR343W-AYOR343W-A AIM7Q12156 149 aa6.78□□□□□ -1.32
YOR343W-AYOR343W-A PDC1P06169 563 aaKnown RBP6.77□□□□□ -1.32
YOR343W-AYOR343W-A TPD3P31383 635 aa6.77□□□□□ -1.32
YOR343W-AYOR343W-A PUS5Q06244 254 aa6.76□□□□□ -1.33
YOR343W-AYOR343W-A KTR1P27810 393 aaKnown RBP6.76□□□□□ -1.33
YOR343W-AYOR343W-A RRD1P40454 393 aaKnown RBP6.76□□□□□ -1.33
YOR343W-AYOR343W-A TRM1P15565 570 aaKnown RBP6.75□□□□□ -1.33
YOR343W-AYOR343W-A HXT10P43581 546 aa6.75□□□□□ -1.33
YOR343W-AYOR343W-A MMP1Q12372 583 aa6.75□□□□□ -1.33
YOR343W-AYOR343W-A LEU3P08638 886 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A ESS1P22696 170 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A GLN1P32288 370 aaKnown RBP6.74□□□□□ -1.33
YOR343W-AYOR343W-A BRE2P43132 505 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A KXD1P53158 218 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A PUS6P53294 404 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A TYW1Q08960 810 aaKnown RBP6.74□□□□□ -1.33
YOR343W-AYOR343W-A MET32Q12041 191 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A YDL206WQ12424 762 aa6.74□□□□□ -1.33
YOR343W-AYOR343W-A RPA14P50106 137 aa6.73□□□□□ -1.33
YOR343W-AYOR343W-A YJU3P28321 313 aa6.72□□□□□ -1.33
YOR343W-AYOR343W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
YOR343W-AYOR343W-A YPR097WQ06839 1073 aa6.71□□□□□ -1.34
YOR343W-AYOR343W-A RSC30P38781 883 aa6.7□□□□□ -1.34
YOR343W-AYOR343W-A TBF1Q02457 562 aa6.7□□□□□ -1.34
YOR343W-AYOR343W-A ALR1Q08269 859 aa6.69□□□□□ -1.34
YOR343W-AYOR343W-A AFT1P22149 690 aa6.66□□□□□ -1.34
YOR343W-AYOR343W-A ASH1P34233 588 aa6.65□□□□□ -1.35
YOR343W-AYOR343W-A CSN12P47130 423 aa6.65□□□□□ -1.35
YOR343W-AYOR343W-A PKH3Q03306 898 aaPredicted RBP6.64□□□□□ -1.35
YOR343W-AYOR343W-A KIN1P13185 1064 aa6.63□□□□□ -1.35
YOR343W-AYOR343W-A GCR2Q01722 534 aa6.63□□□□□ -1.35
YOR343W-AYOR343W-A SYH1Q02875 849 aaKnown RBP6.63□□□□□ -1.35
YOR343W-AYOR343W-A VAC17P25591 423 aa6.59□□□□□ -1.35
YOR343W-AYOR343W-A HST3P53687 447 aa6.59□□□□□ -1.35
YOR343W-AYOR343W-A RAD59Q12223 238 aa6.59□□□□□ -1.35
YOR343W-AYOR343W-A MET22P32179 357 aa6.58□□□□□ -1.36
YOR343W-AYOR343W-A MRT4P33201 236 aaKnown RBP6.58□□□□□ -1.36
YOR343W-AYOR343W-A ARG8P18544 423 aa6.57□□□□□ -1.36
YOR343W-AYOR343W-A KIP2P28743 706 aa6.57□□□□□ -1.36
YOR343W-AYOR343W-A IXR1P33417 597 aa6.57□□□□□ -1.36
YOR343W-AYOR343W-A RPN1P38764 993 aaKnown RBP6.57□□□□□ -1.36
YOR343W-AYOR343W-A YJR115WP47152 169 aa6.57□□□□□ -1.36
YOR343W-AYOR343W-A MSB3P48566 633 aaPredicted RBP6.57□□□□□ -1.36
YOR343W-AYOR343W-A ENV9Q08651 330 aa6.56□□□□□ -1.36
YOR343W-AYOR343W-A GUA1P38625 525 aaKnown RBP6.53□□□□□ -1.36
YOR343W-AYOR343W-A FIG4P42837 879 aa6.53□□□□□ -1.36
YOR343W-AYOR343W-A ITT1Q04638 464 aa6.53□□□□□ -1.36
YOR343W-AYOR343W-A SSA2P10592 639 aaKnown RBP6.52□□□□□ -1.37
YOR343W-AYOR343W-A YPL062WQ02781 134 aa6.52□□□□□ -1.37
YOR343W-AYOR343W-A GAR1P28007 205 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms