RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W TY1A-ML1Q04706 440 aaKnown RBP7.92□□□□□ -1.14
CIK1YMR198W GYP1Q08484 637 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-BRQ12217 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-NL2Q12470 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-GR2Q12485 440 aa7.92□□□□□ -1.14
CIK1YMR198W SEC2P17065 759 aa7.89□□□□□ -1.15
CIK1YMR198W PRT1P06103 763 aaKnown RBP7.89□□□□□ -1.15
CIK1YMR198W SAS4Q04003 481 aa7.88□□□□□ -1.15
CIK1YMR198W RAS1P01119 309 aa7.86□□□□□ -1.15
CIK1YMR198W ERF2Q06551 359 aa7.86□□□□□ -1.15
CIK1YMR198W NPL4P33755 580 aa7.85□□□□□ -1.15
CIK1YMR198W CLB5P30283 435 aa7.84□□□□□ -1.15
CIK1YMR198W KEX2P13134 814 aa7.84□□□□□ -1.15
CIK1YMR198W GCD11P32481 527 aaKnown RBP7.83□□□□□ -1.16
CIK1YMR198W SRC1Q03707 834 aa7.82□□□□□ -1.16
CIK1YMR198W TEA1P47988 759 aa7.81□□□□□ -1.16
CIK1YMR198W AMS1P22855 1083 aa7.8□□□□□ -1.16
CIK1YMR198W NIS1P53939 407 aa7.8□□□□□ -1.16
CIK1YMR198W SIT4P20604 311 aa7.77□□□□□ -1.17
CIK1YMR198W GLC3P32775 704 aa7.76□□□□□ -1.17
CIK1YMR198W RRN7P40992 514 aa7.76□□□□□ -1.17
CIK1YMR198W YNR021WP53723 404 aaKnown RBP7.76□□□□□ -1.17
CIK1YMR198W AGE1Q04412 482 aa7.76□□□□□ -1.17
CIK1YMR198W MRF1P30775 413 aaPredicted RBP7.75□□□□□ -1.17
CIK1YMR198W CST6P40535 587 aa7.74□□□□□ -1.17
CIK1YMR198W RTF1P53064 558 aa7.74□□□□□ -1.17
CIK1YMR198W YEL077CQ3E7X8 1277 aa7.73□□□□□ -1.17
CIK1YMR198W SPT16P32558 1035 aaKnown RBP7.72□□□□□ -1.17
CIK1YMR198W PAC1P39946 494 aaKnown RBP7.72□□□□□ -1.17
CIK1YMR198W FPK1P53739 893 aa7.72□□□□□ -1.17
CIK1YMR198W YNL115CP53925 644 aa7.72□□□□□ -1.17
CIK1YMR198W TUB4P53378 473 aa7.71□□□□□ -1.18
CIK1YMR198W ERG12P07277 443 aa7.7□□□□□ -1.18
CIK1YMR198W LAM6Q08001 693 aa7.69□□□□□ -1.18
CIK1YMR198W ATF2P53296 535 aa7.69□□□□□ -1.18
CIK1YMR198W LEU3P08638 886 aa7.68□□□□□ -1.18
CIK1YMR198W AIM7Q12156 149 aa7.66□□□□□ -1.18
CIK1YMR198W MOD5P07884 428 aa7.66□□□□□ -1.18
CIK1YMR198W SCJ1P25303 377 aa7.66□□□□□ -1.18
CIK1YMR198W BDP1P46678 594 aa7.66□□□□□ -1.18
CIK1YMR198W YMR196WQ04336 1088 aa7.66□□□□□ -1.18
CIK1YMR198W CLA4P48562 842 aa7.65□□□□□ -1.18
CIK1YMR198W HST2P53686 357 aa7.65□□□□□ -1.18
CIK1YMR198W PAT1P25644 796 aaKnown RBP7.64□□□□□ -1.19
CIK1YMR198W FRK1Q03002 865 aaPredicted RBP7.64□□□□□ -1.19
CIK1YMR198W SLY41P22215 453 aa7.63□□□□□ -1.19
CIK1YMR198W AIR1P40507 360 aaKnown RBP7.62□□□□□ -1.19
CIK1YMR198W KTR1P27810 393 aaKnown RBP7.61□□□□□ -1.19
CIK1YMR198W TRK1P12685 1235 aa7.59□□□□□ -1.19
CIK1YMR198W TYW1Q08960 810 aaKnown RBP7.59□□□□□ -1.19
CIK1YMR198W MMP1Q12372 583 aa7.59□□□□□ -1.2
CIK1YMR198W ESS1P22696 170 aa7.58□□□□□ -1.2
CIK1YMR198W GLN1P32288 370 aaKnown RBP7.57□□□□□ -1.2
CIK1YMR198W TRM1P15565 570 aaKnown RBP7.56□□□□□ -1.2
CIK1YMR198W PDC1P06169 563 aaKnown RBP7.56□□□□□ -1.2
CIK1YMR198W YJU3P28321 313 aa7.56□□□□□ -1.2
CIK1YMR198W PUS5Q06244 254 aa7.54□□□□□ -1.2
CIK1YMR198W YDL206WQ12424 762 aa7.54□□□□□ -1.2
CIK1YMR198W TPD3P31383 635 aa7.54□□□□□ -1.2
CIK1YMR198W PUS6P53294 404 aa7.54□□□□□ -1.2
CIK1YMR198W KIN1P13185 1064 aa7.53□□□□□ -1.2
CIK1YMR198W RRD1P40454 393 aaKnown RBP7.53□□□□□ -1.2
CIK1YMR198W HXT10P43581 546 aa7.53□□□□□ -1.2
CIK1YMR198W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
CIK1YMR198W KXD1P53158 218 aa7.51□□□□□ -1.21
CIK1YMR198W HED1Q03937 162 aa7.51□□□□□ -1.21
CIK1YMR198W RSC30P38781 883 aa7.51□□□□□ -1.21
CIK1YMR198W CSN12P47130 423 aa7.51□□□□□ -1.21
CIK1YMR198W RPA14P50106 137 aa7.51□□□□□ -1.21
CIK1YMR198W TBF1Q02457 562 aa7.5□□□□□ -1.21
CIK1YMR198W YPR097WQ06839 1073 aa7.5□□□□□ -1.21
CIK1YMR198W CDC4P07834 779 aa7.49□□□□□ -1.21
CIK1YMR198W RPN1P38764 993 aaKnown RBP7.49□□□□□ -1.21
CIK1YMR198W PKH3Q03306 898 aaPredicted RBP7.48□□□□□ -1.21
CIK1YMR198W ALR1Q08269 859 aa7.47□□□□□ -1.21
CIK1YMR198W MET32Q12041 191 aa7.47□□□□□ -1.21
CIK1YMR198W GUA1P38625 525 aaKnown RBP7.43□□□□□ -1.22
CIK1YMR198W ARG8P18544 423 aa7.42□□□□□ -1.22
CIK1YMR198W BRE2P43132 505 aa7.42□□□□□ -1.22
CIK1YMR198W RAD59Q12223 238 aa7.42□□□□□ -1.22
CIK1YMR198W SYH1Q02875 849 aaKnown RBP7.4□□□□□ -1.23
CIK1YMR198W SSA2P10592 639 aaKnown RBP7.38□□□□□ -1.23
CIK1YMR198W AFT1P22149 690 aa7.38□□□□□ -1.23
CIK1YMR198W ASH1P34233 588 aa7.38□□□□□ -1.23
CIK1YMR198W VAC17P25591 423 aa7.36□□□□□ -1.23
CIK1YMR198W KIP2P28743 706 aa7.35□□□□□ -1.23
CIK1YMR198W IXR1P33417 597 aa7.34□□□□□ -1.23
CIK1YMR198W ITT1Q04638 464 aa7.34□□□□□ -1.23
CIK1YMR198W MRT4P33201 236 aaKnown RBP7.32□□□□□ -1.24
CIK1YMR198W FIG4P42837 879 aa7.32□□□□□ -1.24
CIK1YMR198W HST3P53687 447 aa7.31□□□□□ -1.24
CIK1YMR198W GCR2Q01722 534 aa7.31□□□□□ -1.24
CIK1YMR198W HPC2Q01448 625 aa7.31□□□□□ -1.24
CIK1YMR198W MAK16P10962 306 aaPredicted RBP7.3□□□□□ -1.24
CIK1YMR198W YJR115WP47152 169 aa7.29□□□□□ -1.24
CIK1YMR198W MSB3P48566 633 aaPredicted RBP7.29□□□□□ -1.24
CIK1YMR198W YPR084WQ06821 456 aa7.28□□□□□ -1.24
CIK1YMR198W TFB3Q03290 321 aa7.27□□□□□ -1.25
CIK1YMR198W MET22P32179 357 aa7.25□□□□□ -1.25
CIK1YMR198W APP1P53933 587 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms