RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C TY1A-BRQ12217 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-NL2Q12470 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-GR2Q12485 440 aa7.87□□□□□ -1.15
ATG38YLR211C SEC2P17065 759 aa7.86□□□□□ -1.15
ATG38YLR211C GYP1Q08484 637 aa7.85□□□□□ -1.15
ATG38YLR211C ERF2Q06551 359 aa7.84□□□□□ -1.15
ATG38YLR211C PRT1P06103 763 aaKnown RBP7.83□□□□□ -1.16
ATG38YLR211C KEX2P13134 814 aa7.81□□□□□ -1.16
ATG38YLR211C CLB5P30283 435 aa7.81□□□□□ -1.16
ATG38YLR211C NPL4P33755 580 aa7.81□□□□□ -1.16
ATG38YLR211C SAS4Q04003 481 aa7.81□□□□□ -1.16
ATG38YLR211C DPS1P04802 557 aaKnown RBP7.8□□□□□ -1.16
ATG38YLR211C GCD11P32481 527 aaKnown RBP7.8□□□□□ -1.16
ATG38YLR211C TEA1P47988 759 aa7.8□□□□□ -1.16
ATG38YLR211C YNR021WP53723 404 aaKnown RBP7.8□□□□□ -1.16
ATG38YLR211C NIS1P53939 407 aa7.79□□□□□ -1.16
ATG38YLR211C RAS1P01119 309 aa7.78□□□□□ -1.16
ATG38YLR211C GLC3P32775 704 aa7.78□□□□□ -1.16
ATG38YLR211C SIT4P20604 311 aa7.77□□□□□ -1.17
ATG38YLR211C LEU3P08638 886 aa7.74□□□□□ -1.17
ATG38YLR211C FPK1P53739 893 aa7.72□□□□□ -1.17
ATG38YLR211C AGE1Q04412 482 aa7.72□□□□□ -1.17
ATG38YLR211C AMS1P22855 1083 aa7.71□□□□□ -1.18
ATG38YLR211C RRN7P40992 514 aa7.71□□□□□ -1.18
ATG38YLR211C ATF2P53296 535 aa7.71□□□□□ -1.18
ATG38YLR211C YNL115CP53925 644 aa7.71□□□□□ -1.18
ATG38YLR211C RTF1P53064 558 aa7.7□□□□□ -1.18
ATG38YLR211C SRC1Q03707 834 aa7.7□□□□□ -1.18
ATG38YLR211C PAC1P39946 494 aaKnown RBP7.69□□□□□ -1.18
ATG38YLR211C SCJ1P25303 377 aa7.68□□□□□ -1.18
ATG38YLR211C MRF1P30775 413 aaPredicted RBP7.68□□□□□ -1.18
ATG38YLR211C CST6P40535 587 aa7.68□□□□□ -1.18
ATG38YLR211C SPT16P32558 1035 aaKnown RBP7.67□□□□□ -1.18
ATG38YLR211C TUB4P53378 473 aa7.67□□□□□ -1.18
ATG38YLR211C AIM7Q12156 149 aa7.67□□□□□ -1.18
ATG38YLR211C YEL077CQ3E7X8 1277 aa7.65□□□□□ -1.18
ATG38YLR211C HST2P53686 357 aa7.64□□□□□ -1.19
ATG38YLR211C YMR196WQ04336 1088 aa7.64□□□□□ -1.19
ATG38YLR211C ERG12P07277 443 aa7.63□□□□□ -1.19
ATG38YLR211C SLY41P22215 453 aa7.62□□□□□ -1.19
ATG38YLR211C KTR1P27810 393 aaKnown RBP7.62□□□□□ -1.19
ATG38YLR211C LAM6Q08001 693 aa7.62□□□□□ -1.19
ATG38YLR211C MOD5P07884 428 aa7.61□□□□□ -1.19
ATG38YLR211C TYW1Q08960 810 aaKnown RBP7.61□□□□□ -1.19
ATG38YLR211C PAT1P25644 796 aaKnown RBP7.6□□□□□ -1.19
ATG38YLR211C CLA4P48562 842 aa7.6□□□□□ -1.19
ATG38YLR211C BDP1P46678 594 aa7.59□□□□□ -1.19
ATG38YLR211C MMP1Q12372 583 aa7.59□□□□□ -1.19
ATG38YLR211C KIN1P13185 1064 aa7.58□□□□□ -1.2
ATG38YLR211C ESS1P22696 170 aa7.58□□□□□ -1.2
ATG38YLR211C YJU3P28321 313 aa7.57□□□□□ -1.2
ATG38YLR211C GLN1P32288 370 aaKnown RBP7.57□□□□□ -1.2
ATG38YLR211C FRK1Q03002 865 aaPredicted RBP7.57□□□□□ -1.2
ATG38YLR211C RPN1P38764 993 aaKnown RBP7.56□□□□□ -1.2
ATG38YLR211C TRM1P15565 570 aaKnown RBP7.54□□□□□ -1.2
ATG38YLR211C AIR1P40507 360 aaKnown RBP7.54□□□□□ -1.2
ATG38YLR211C PUS6P53294 404 aa7.54□□□□□ -1.2
ATG38YLR211C CSN12P47130 423 aa7.53□□□□□ -1.2
ATG38YLR211C PDC1P06169 563 aaKnown RBP7.52□□□□□ -1.21
ATG38YLR211C RSC30P38781 883 aa7.52□□□□□ -1.21
ATG38YLR211C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
ATG38YLR211C YDL206WQ12424 762 aa7.51□□□□□ -1.21
ATG38YLR211C TPD3P31383 635 aa7.5□□□□□ -1.21
ATG38YLR211C PUS5Q06244 254 aa7.5□□□□□ -1.21
ATG38YLR211C TRK1P12685 1235 aa7.49□□□□□ -1.21
ATG38YLR211C HXT10P43581 546 aa7.49□□□□□ -1.21
ATG38YLR211C RPA14P50106 137 aa7.48□□□□□ -1.21
ATG38YLR211C KXD1P53158 218 aa7.48□□□□□ -1.21
ATG38YLR211C PKH3Q03306 898 aaPredicted RBP7.48□□□□□ -1.21
ATG38YLR211C YPR097WQ06839 1073 aa7.48□□□□□ -1.21
ATG38YLR211C GUA1P38625 525 aaKnown RBP7.47□□□□□ -1.21
ATG38YLR211C RRD1P40454 393 aaKnown RBP7.47□□□□□ -1.21
ATG38YLR211C TBF1Q02457 562 aa7.47□□□□□ -1.21
ATG38YLR211C HED1Q03937 162 aa7.46□□□□□ -1.22
ATG38YLR211C ALR1Q08269 859 aa7.44□□□□□ -1.22
ATG38YLR211C RAD59Q12223 238 aa7.43□□□□□ -1.22
ATG38YLR211C CDC4P07834 779 aa7.42□□□□□ -1.22
ATG38YLR211C ARG8P18544 423 aa7.42□□□□□ -1.22
ATG38YLR211C MET32Q12041 191 aa7.42□□□□□ -1.22
ATG38YLR211C SSA2P10592 639 aaKnown RBP7.39□□□□□ -1.23
ATG38YLR211C VAC17P25591 423 aa7.34□□□□□ -1.23
ATG38YLR211C ASH1P34233 588 aa7.34□□□□□ -1.23
ATG38YLR211C HPC2Q01448 625 aa7.34□□□□□ -1.23
ATG38YLR211C SYH1Q02875 849 aaKnown RBP7.34□□□□□ -1.23
ATG38YLR211C ITT1Q04638 464 aa7.34□□□□□ -1.23
ATG38YLR211C BRE2P43132 505 aa7.33□□□□□ -1.24
ATG38YLR211C FIG4P42837 879 aa7.32□□□□□ -1.24
ATG38YLR211C AFT1P22149 690 aa7.31□□□□□ -1.24
ATG38YLR211C KIP2P28743 706 aa7.31□□□□□ -1.24
ATG38YLR211C IXR1P33417 597 aa7.31□□□□□ -1.24
ATG38YLR211C TFB3Q03290 321 aa7.31□□□□□ -1.24
ATG38YLR211C MAK16P10962 306 aaPredicted RBP7.3□□□□□ -1.24
ATG38YLR211C PKC1P24583 1151 aa7.3□□□□□ -1.24
ATG38YLR211C MRT4P33201 236 aaKnown RBP7.28□□□□□ -1.24
ATG38YLR211C YPR084WQ06821 456 aa7.28□□□□□ -1.24
ATG38YLR211C LEO1P38439 464 aa7.27□□□□□ -1.25
ATG38YLR211C HST3P53687 447 aa7.26□□□□□ -1.25
ATG38YLR211C RGA2Q06407 1009 aa7.26□□□□□ -1.25
ATG38YLR211C YJR115WP47152 169 aa7.24□□□□□ -1.25
ATG38YLR211C TEC1P18412 486 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms