RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C GRX4P32642 244 aa3.04□□□□□ -1.92
VPS13YLL040C ALD4P46367 519 aaKnown RBP3.04□□□□□ -1.92
VPS13YLL040C AUS1Q08409 1394 aa3.03□□□□□ -1.92
VPS13YLL040C ADE6P38972 1358 aaKnown RBP3.03□□□□□ -1.92
VPS13YLL040C IME2P32581 645 aa3.03□□□□□ -1.92
VPS13YLL040C TCB2P48231 1178 aa3.03□□□□□ -1.92
VPS13YLL040C TY1B-NL2Q99337 1749 aaKnown RBP3.03□□□□□ -1.92
VPS13YLL040C OPY1P38271 328 aa3.03□□□□□ -1.92
VPS13YLL040C ORC1P54784 914 aaPredicted RBP3.02□□□□□ -1.93
VPS13YLL040C HYR1P40581 163 aaKnown RBP3.02□□□□□ -1.93
VPS13YLL040C SPE2P21182 396 aa3.01□□□□□ -1.93
VPS13YLL040C RPO41P13433 1351 aaKnown RBP3.01□□□□□ -1.93
VPS13YLL040C IPL1P38991 367 aa3.01□□□□□ -1.93
VPS13YLL040C PIL1P53252 339 aaKnown RBP3.01□□□□□ -1.93
VPS13YLL040C SNF7P39929 240 aaKnown RBP3□□□□□ -1.93
VPS13YLL040C CHZ1P40019 153 aaPredicted RBP3□□□□□ -1.93
VPS13YLL040C CTF4Q01454 927 aa3□□□□□ -1.93
VPS13YLL040C YPR148CQ06523 435 aa3□□□□□ -1.93
VPS13YLL040C RQC2Q12532 1038 aaKnown RBP3□□□□□ -1.93
VPS13YLL040C SNF2P22082 1703 aa3□□□□□ -1.93
VPS13YLL040C AIM44Q99299 758 aa2.99□□□□□ -1.93
VPS13YLL040C ROM2P51862 1356 aaKnown RBP2.99□□□□□ -1.93
VPS13YLL040C HEF3P53978 1044 aaKnown RBP2.98□□□□□ -1.93
VPS13YLL040C YEF3P16521 1044 aaKnown RBP2.98□□□□□ -1.93
VPS13YLL040C MTR4P47047 1073 aaKnown RBP2.97□□□□□ -1.93
VPS13YLL040C YJR008WP47085 338 aa2.97□□□□□ -1.93
VPS13YLL040C PSD2P53037 1138 aaKnown RBP2.97□□□□□ -1.93
VPS13YLL040C ROX1P25042 368 aa2.97□□□□□ -1.93
VPS13YLL040C MAM1P40065 302 aa2.97□□□□□ -1.93
VPS13YLL040C CLC1P17891 233 aa2.97□□□□□ -1.93
VPS13YLL040C MAK21Q12176 1025 aaKnown RBP2.97□□□□□ -1.93
VPS13YLL040C NOT3P06102 836 aaKnown RBP2.97□□□□□ -1.93
VPS13YLL040C CKB1P43639 278 aa2.97□□□□□ -1.93
VPS13YLL040C HAP5Q02516 242 aa2.96□□□□□ -1.94
VPS13YLL040C RAD50P12753 1312 aa2.96□□□□□ -1.94
VPS13YLL040C PDR18P53756 1333 aa2.96□□□□□ -1.94
VPS13YLL040C RLF2Q12495 606 aa2.96□□□□□ -1.94
VPS13YLL040C YAP3P38749 330 aa2.95□□□□□ -1.94
VPS13YLL040C RPL22AP05749 121 aaKnown RBP2.95□□□□□ -1.94
VPS13YLL040C PDI1P17967 522 aaKnown RBP2.95□□□□□ -1.94
VPS13YLL040C KIP3P53086 805 aaKnown RBP2.95□□□□□ -1.94
VPS13YLL040C MPE1P35728 441 aaKnown RBP2.95□□□□□ -1.94
VPS13YLL040C FAR11P53917 953 aa2.95□□□□□ -1.94
VPS13YLL040C ELM1P32801 640 aa2.95□□□□□ -1.94
VPS13YLL040C YIL092WP40497 633 aa2.95□□□□□ -1.94
VPS13YLL040C RAD2P07276 1031 aa2.94□□□□□ -1.94
VPS13YLL040C NUP145P49687 1317 aa2.94□□□□□ -1.94
VPS13YLL040C BNI1P41832 1953 aa2.94□□□□□ -1.94
VPS13YLL040C FPR3P38911 411 aaKnown RBP2.94□□□□□ -1.94
VPS13YLL040C QCR6P00127 147 aa2.94□□□□□ -1.94
VPS13YLL040C VPS24P36095 224 aaKnown RBP2.94□□□□□ -1.94
VPS13YLL040C YRF1-2P40105 1681 aa2.94□□□□□ -1.94
VPS13YLL040C EAF7P53911 425 aaKnown RBP2.94□□□□□ -1.94
VPS13YLL040C RVB2Q12464 471 aaKnown RBP2.94□□□□□ -1.94
VPS13YLL040C GCD7P32502 381 aaPredicted RBP2.94□□□□□ -1.94
VPS13YLL040C EBP2P36049 427 aaKnown RBP2.94□□□□□ -1.94
VPS13YLL040C YDL144CQ07589 356 aa2.94□□□□□ -1.94
VPS13YLL040C TAF13P11747 167 aa2.93□□□□□ -1.94
VPS13YLL040C RAD9P14737 1309 aa2.93□□□□□ -1.94
VPS13YLL040C RPS19AP07280 144 aaKnown RBP2.93□□□□□ -1.94
VPS13YLL040C RPS19BP07281 144 aaPredicted RBP2.93□□□□□ -1.94
VPS13YLL040C CDC16P09798 840 aa2.93□□□□□ -1.94
VPS13YLL040C SUI2P20459 304 aaKnown RBP2.93□□□□□ -1.94
VPS13YLL040C YNL050CP53952 270 aa2.93□□□□□ -1.94
VPS13YLL040C DAL5P15365 543 aa2.93□□□□□ -1.94
VPS13YLL040C RPC31P17890 251 aa2.93□□□□□ -1.94
VPS13YLL040C CAB3P36076 571 aa2.93□□□□□ -1.94
VPS13YLL040C SAC3P46674 1301 aa2.93□□□□□ -1.94
VPS13YLL040C RRP46P53256 223 aaPredicted RBP2.92□□□□□ -1.94
VPS13YLL040C NPL4P33755 580 aa2.92□□□□□ -1.94
VPS13YLL040C BDH2P39713 417 aa2.92□□□□□ -1.94
VPS13YLL040C MSP1P28737 362 aa2.92□□□□□ -1.94
VPS13YLL040C RTF1P53064 558 aa2.92□□□□□ -1.94
VPS13YLL040C RRT14P40470 206 aa2.92□□□□□ -1.94
VPS13YLL040C KRE33P53914 1056 aaKnown RBP2.92□□□□□ -1.94
VPS13YLL040C RRP5Q05022 1729 aaKnown RBP2.91□□□□□ -1.94
VPS13YLL040C PRD1P25375 712 aa2.91□□□□□ -1.94
VPS13YLL040C RKM3P38222 552 aa2.91□□□□□ -1.94
VPS13YLL040C KRI1P42846 591 aaKnown RBP2.91□□□□□ -1.94
VPS13YLL040C PCT1P13259 424 aa2.91□□□□□ -1.94
VPS13YLL040C LEU2P04173 364 aaPredicted RBP2.9□□□□□ -1.94
VPS13YLL040C TAF8Q03750 510 aa2.9□□□□□ -1.94
VPS13YLL040C YPP1P46951 817 aa2.9□□□□□ -1.95
VPS13YLL040C RSF2P46974 1380 aa2.9□□□□□ -1.95
VPS13YLL040C MLP1Q02455 1875 aaKnown RBP2.9□□□□□ -1.95
VPS13YLL040C UGA3P26370 528 aa2.9□□□□□ -1.95
VPS13YLL040C TAF5P38129 798 aa2.89□□□□□ -1.95
VPS13YLL040C HST1P53685 503 aa2.89□□□□□ -1.95
VPS13YLL040C ETT1Q08421 412 aaKnown RBP2.89□□□□□ -1.95
VPS13YLL040C SIS2P36024 562 aa2.89□□□□□ -1.95
VPS13YLL040C RTG3P38165 486 aa2.89□□□□□ -1.95
VPS13YLL040C THI22Q06490 572 aa2.89□□□□□ -1.95
VPS13YLL040C RPN1P38764 993 aaKnown RBP2.89□□□□□ -1.95
VPS13YLL040C NOP53Q12080 455 aaKnown RBP2.89□□□□□ -1.95
VPS13YLL040C YMR196WQ04336 1088 aa2.89□□□□□ -1.95
VPS13YLL040C POL32P47110 350 aa2.88□□□□□ -1.95
VPS13YLL040C KEX1P09620 729 aa2.88□□□□□ -1.95
VPS13YLL040C CPS1P27614 576 aa2.88□□□□□ -1.95
VPS13YLL040C RFT1P38206 574 aaPredicted RBP2.88□□□□□ -1.95
VPS13YLL040C SPO22P40511 975 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms