RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeastyeast

Gene SOP4, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOP4YJL192C TY1A-JR2P47099 440 aa6.8□□□□□ -1.32
SOP4YJL192C TY1A-DR1Q03856 440 aa6.8□□□□□ -1.32
SOP4YJL192C TY1A-ML1Q04706 440 aaKnown RBP6.8□□□□□ -1.32
SOP4YJL192C TY1A-BRQ12217 440 aa6.8□□□□□ -1.32
SOP4YJL192C TY1A-NL2Q12470 440 aa6.8□□□□□ -1.32
SOP4YJL192C TY1A-GR2Q12485 440 aa6.8□□□□□ -1.32
SOP4YJL192C DIT2P21595 489 aa6.79□□□□□ -1.32
SOP4YJL192C NPL4P33755 580 aa6.78□□□□□ -1.32
SOP4YJL192C RAS1P01119 309 aa6.77□□□□□ -1.33
SOP4YJL192C PRT1P06103 763 aaKnown RBP6.77□□□□□ -1.33
SOP4YJL192C SEC2P17065 759 aa6.76□□□□□ -1.33
SOP4YJL192C GCD11P32481 527 aaKnown RBP6.76□□□□□ -1.33
SOP4YJL192C ERF2Q06551 359 aa6.76□□□□□ -1.33
SOP4YJL192C KEX2P13134 814 aa6.75□□□□□ -1.33
SOP4YJL192C SAS4Q04003 481 aa6.75□□□□□ -1.33
SOP4YJL192C RGA1P39083 1007 aa6.74□□□□□ -1.33
SOP4YJL192C AMS1P22855 1083 aa6.71□□□□□ -1.34
SOP4YJL192C CLB5P30283 435 aa6.7□□□□□ -1.34
SOP4YJL192C RRN7P40992 514 aa6.7□□□□□ -1.34
SOP4YJL192C TEA1P47988 759 aa6.7□□□□□ -1.34
SOP4YJL192C NIS1P53939 407 aa6.68□□□□□ -1.34
SOP4YJL192C GLC3P32775 704 aa6.67□□□□□ -1.34
SOP4YJL192C YEL077CQ3E7X8 1277 aa6.67□□□□□ -1.34
SOP4YJL192C MRF1P30775 413 aaPredicted RBP6.66□□□□□ -1.34
SOP4YJL192C SPT16P32558 1035 aaKnown RBP6.66□□□□□ -1.34
SOP4YJL192C CST6P40535 587 aa6.66□□□□□ -1.34
SOP4YJL192C ERG12P07277 443 aa6.64□□□□□ -1.35
SOP4YJL192C PAC1P39946 494 aaKnown RBP6.64□□□□□ -1.35
SOP4YJL192C AGE1Q04412 482 aa6.63□□□□□ -1.35
SOP4YJL192C FPK1P53739 893 aa6.62□□□□□ -1.35
SOP4YJL192C FRK1Q03002 865 aaPredicted RBP6.62□□□□□ -1.35
SOP4YJL192C SIT4P20604 311 aa6.61□□□□□ -1.35
SOP4YJL192C CLA4P48562 842 aa6.61□□□□□ -1.35
SOP4YJL192C ATF2P53296 535 aa6.61□□□□□ -1.35
SOP4YJL192C TUB4P53378 473 aa6.61□□□□□ -1.35
SOP4YJL192C YNR021WP53723 404 aaKnown RBP6.61□□□□□ -1.35
SOP4YJL192C YMR196WQ04336 1088 aa6.61□□□□□ -1.35
SOP4YJL192C YNL115CP53925 644 aa6.6□□□□□ -1.35
SOP4YJL192C LAM6Q08001 693 aa6.6□□□□□ -1.35
SOP4YJL192C BDP1P46678 594 aa6.59□□□□□ -1.35
SOP4YJL192C RTF1P53064 558 aa6.59□□□□□ -1.35
SOP4YJL192C SCJ1P25303 377 aa6.58□□□□□ -1.36
SOP4YJL192C PAT1P25644 796 aaKnown RBP6.58□□□□□ -1.36
SOP4YJL192C AIR1P40507 360 aaKnown RBP6.58□□□□□ -1.36
SOP4YJL192C SLY41P22215 453 aa6.57□□□□□ -1.36
SOP4YJL192C TRK1P12685 1235 aa6.54□□□□□ -1.36
SOP4YJL192C TYW1Q08960 810 aaKnown RBP6.54□□□□□ -1.36
SOP4YJL192C MOD5P07884 428 aa6.52□□□□□ -1.37
SOP4YJL192C ESS1P22696 170 aa6.52□□□□□ -1.37
SOP4YJL192C HST2P53686 357 aa6.52□□□□□ -1.37
SOP4YJL192C PUS5Q06244 254 aa6.51□□□□□ -1.37
SOP4YJL192C AIM7Q12156 149 aa6.51□□□□□ -1.37
SOP4YJL192C LEU3P08638 886 aa6.5□□□□□ -1.37
SOP4YJL192C MMP1Q12372 583 aa6.5□□□□□ -1.37
SOP4YJL192C TRM1P15565 570 aaKnown RBP6.49□□□□□ -1.37
SOP4YJL192C KTR1P27810 393 aaKnown RBP6.49□□□□□ -1.37
SOP4YJL192C YJU3P28321 313 aa6.49□□□□□ -1.37
SOP4YJL192C GLN1P32288 370 aaKnown RBP6.49□□□□□ -1.37
SOP4YJL192C YDL206WQ12424 762 aa6.49□□□□□ -1.37
SOP4YJL192C PDC1P06169 563 aaKnown RBP6.48□□□□□ -1.37
SOP4YJL192C TBF1Q02457 562 aa6.48□□□□□ -1.37
SOP4YJL192C RRD1P40454 393 aaKnown RBP6.46□□□□□ -1.38
SOP4YJL192C KXD1P53158 218 aa6.46□□□□□ -1.38
SOP4YJL192C PUS6P53294 404 aa6.45□□□□□ -1.38
SOP4YJL192C HXT10P43581 546 aa6.44□□□□□ -1.38
SOP4YJL192C PKH3Q03306 898 aaPredicted RBP6.44□□□□□ -1.38
SOP4YJL192C CDC4P07834 779 aa6.43□□□□□ -1.38
SOP4YJL192C KIN1P13185 1064 aa6.43□□□□□ -1.38
SOP4YJL192C HED1Q03937 162 aa6.43□□□□□ -1.38
SOP4YJL192C CSN12P47130 423 aa6.42□□□□□ -1.38
SOP4YJL192C MET32Q12041 191 aa6.42□□□□□ -1.38
SOP4YJL192C RPA14P50106 137 aa6.41□□□□□ -1.38
SOP4YJL192C ALR1Q08269 859 aa6.41□□□□□ -1.38
SOP4YJL192C TPD3P31383 635 aa6.4□□□□□ -1.38
SOP4YJL192C BRE2P43132 505 aa6.4□□□□□ -1.38
SOP4YJL192C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SOP4YJL192C YPR097WQ06839 1073 aa6.39□□□□□ -1.39
SOP4YJL192C ARG8P18544 423 aa6.38□□□□□ -1.39
SOP4YJL192C RSC30P38781 883 aa6.38□□□□□ -1.39
SOP4YJL192C RPN1P38764 993 aaKnown RBP6.37□□□□□ -1.39
SOP4YJL192C ASH1P34233 588 aa6.35□□□□□ -1.39
SOP4YJL192C SYH1Q02875 849 aaKnown RBP6.35□□□□□ -1.39
SOP4YJL192C RAD59Q12223 238 aa6.35□□□□□ -1.39
SOP4YJL192C KIP2P28743 706 aa6.34□□□□□ -1.39
SOP4YJL192C ITT1Q04638 464 aa6.34□□□□□ -1.39
SOP4YJL192C GUA1P38625 525 aaKnown RBP6.33□□□□□ -1.4
SOP4YJL192C IXR1P33417 597 aa6.32□□□□□ -1.4
SOP4YJL192C HST3P53687 447 aa6.32□□□□□ -1.4
SOP4YJL192C YPL062WQ02781 134 aa6.32□□□□□ -1.4
SOP4YJL192C AFT1P22149 690 aa6.31□□□□□ -1.4
SOP4YJL192C SSA2P10592 639 aaKnown RBP6.3□□□□□ -1.4
SOP4YJL192C GCR2Q01722 534 aa6.3□□□□□ -1.4
SOP4YJL192C VAC17P25591 423 aa6.29□□□□□ -1.4
SOP4YJL192C YJR115WP47152 169 aa6.27□□□□□ -1.41
SOP4YJL192C FIG4P42837 879 aa6.26□□□□□ -1.41
SOP4YJL192C GAR1P28007 205 aaKnown RBP6.25□□□□□ -1.41
SOP4YJL192C APP1P53933 587 aa6.25□□□□□ -1.41
SOP4YJL192C UGA3P26370 528 aa6.23□□□□□ -1.41
SOP4YJL192C MET22P32179 357 aa6.23□□□□□ -1.41
SOP4YJL192C MRT4P33201 236 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms