RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W ESC1Q03661 1658 aaKnown RBP8.63□□□□□ -1.03
RPB4YJL140W PDR1P12383 1068 aa8.63□□□□□ -1.03
RPB4YJL140W RAM1P22007 431 aa8.62□□□□□ -1.03
RPB4YJL140W PEX21P50091 288 aa8.61□□□□□ -1.03
RPB4YJL140W TFB4Q12004 338 aa8.61□□□□□ -1.03
RPB4YJL140W GAP1P19145 602 aaPredicted RBP8.6□□□□□ -1.03
RPB4YJL140W DSF2P38213 736 aa8.6□□□□□ -1.03
RPB4YJL140W DNF1P32660 1571 aa8.6□□□□□ -1.03
RPB4YJL140W LTE1P07866 1435 aa8.58□□□□□ -1.04
RPB4YJL140W SPB4P25808 606 aaPredicted RBP8.58□□□□□ -1.04
RPB4YJL140W ORC6P38826 435 aa8.58□□□□□ -1.04
RPB4YJL140W GYP1Q08484 637 aa8.58□□□□□ -1.04
RPB4YJL140W MAM3Q12296 706 aa8.58□□□□□ -1.04
RPB4YJL140W RKR1Q04781 1562 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-LR1P0C2J3 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-FP0CX63 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-GR2P0CX64 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-CP25384 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-DR2Q03494 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY1B-DR1Q03855 1755 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-DR3Q07791 1770 aaKnown RBP8.56□□□□□ -1.04
RPB4YJL140W TY2B-OR1Q12113 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-DR1Q12472 1770 aa8.56□□□□□ -1.04
RPB4YJL140W TY2B-OR2Q12501 1770 aa8.56□□□□□ -1.04
RPB4YJL140W PAN1P32521 1480 aa8.56□□□□□ -1.04
RPB4YJL140W YRR1Q12172 810 aa8.54□□□□□ -1.04
RPB4YJL140W TY1B-BRQ12193 1756 aa8.53□□□□□ -1.04
RPB4YJL140W TY1B-GR3Q12316 1755 aa8.53□□□□□ -1.04
RPB4YJL140W TY1B-ORQ92393 1755 aa8.53□□□□□ -1.04
RPB4YJL140W RPA190P10964 1664 aaKnown RBP8.53□□□□□ -1.04
RPB4YJL140W MVP1P40959 511 aaKnown RBP8.52□□□□□ -1.05
RPB4YJL140W TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
RPB4YJL140W RGR1P19263 1082 aa8.5□□□□□ -1.05
RPB4YJL140W PSE1P32337 1089 aaKnown RBP8.5□□□□□ -1.05
RPB4YJL140W GEA2P39993 1459 aaKnown RBP8.5□□□□□ -1.05
RPB4YJL140W TOP2P06786 1428 aaKnown RBP8.49□□□□□ -1.05
RPB4YJL140W SAS4Q04003 481 aa8.49□□□□□ -1.05
RPB4YJL140W RAS1P01119 309 aa8.48□□□□□ -1.05
RPB4YJL140W IES2P40154 320 aa8.47□□□□□ -1.05
RPB4YJL140W TRM732Q03496 1420 aa8.46□□□□□ -1.06
RPB4YJL140W MMS22Q06164 1454 aa8.45□□□□□ -1.06
RPB4YJL140W YPR109WQ06104 294 aa8.45□□□□□ -1.06
RPB4YJL140W BUD20Q08004 166 aaPredicted RBP8.45□□□□□ -1.06
RPB4YJL140W TY2B-BQ12491 1770 aa8.45□□□□□ -1.06
RPB4YJL140W BNI1P41832 1953 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-HO13535 1793 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-DR5P0C2I2 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-DR6P0C2I3 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-LR2P0C2I5 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-LR3P0C2I6 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W TY1B-PR1P0C2I9 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W TY1B-PR2P0C2J0 1756 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-PR3P0C2J1 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W TY1B-JR1P47098 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-ML2Q03434 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W TY1B-ER1Q03612 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-ML1Q04711 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W TY1B-GR2Q12269 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-OLQ12273 1755 aa8.44□□□□□ -1.06
RPB4YJL140W TY1B-PLQ12414 1755 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W CLB5P30283 435 aa8.44□□□□□ -1.06
RPB4YJL140W NUP42P49686 430 aaKnown RBP8.44□□□□□ -1.06
RPB4YJL140W PRT1P06103 763 aaKnown RBP8.43□□□□□ -1.06
RPB4YJL140W NUD1P32336 851 aa8.43□□□□□ -1.06
RPB4YJL140W NPL4P33755 580 aa8.43□□□□□ -1.06
RPB4YJL140W STR2P47164 639 aa8.42□□□□□ -1.06
RPB4YJL140W ISM1P48526 1002 aa8.42□□□□□ -1.06
RPB4YJL140W SRC1Q03707 834 aa8.42□□□□□ -1.06
RPB4YJL140W ITT1Q04638 464 aa8.42□□□□□ -1.06
RPB4YJL140W TY1B-DR3Q99231 1755 aa8.42□□□□□ -1.06
RPB4YJL140W AMS1P22855 1083 aa8.41□□□□□ -1.06
RPB4YJL140W MRF1P30775 413 aaPredicted RBP8.39□□□□□ -1.07
RPB4YJL140W SDH2P21801 266 aa8.38□□□□□ -1.07
RPB4YJL140W YEL077CQ3E7X8 1277 aa8.38□□□□□ -1.07
RPB4YJL140W POL1P13382 1468 aa8.38□□□□□ -1.07
RPB4YJL140W MMS1Q06211 1407 aa8.37□□□□□ -1.07
RPB4YJL140W DIT2P21595 489 aa8.37□□□□□ -1.07
RPB4YJL140W GCD11P32481 527 aaKnown RBP8.36□□□□□ -1.07
RPB4YJL140W NUP159P40477 1460 aa8.36□□□□□ -1.07
RPB4YJL140W DRS2P39524 1355 aa8.35□□□□□ -1.07
RPB4YJL140W VPS15P22219 1454 aa8.35□□□□□ -1.07
RPB4YJL140W TEA1P47988 759 aa8.34□□□□□ -1.07
RPB4YJL140W SPP41P38904 1435 aa8.34□□□□□ -1.07
RPB4YJL140W SMC4Q12267 1418 aa8.34□□□□□ -1.07
RPB4YJL140W YOR1P53049 1477 aa8.33□□□□□ -1.08
RPB4YJL140W NTE1Q04958 1679 aa8.31□□□□□ -1.08
RPB4YJL140W YRF1-1P0CX20 1796 aa8.31□□□□□ -1.08
RPB4YJL140W YRF1-5P0CX21 1796 aa8.31□□□□□ -1.08
RPB4YJL140W YRF1-8P0CX22 1796 aa8.31□□□□□ -1.08
RPB4YJL140W STU1P38198 1513 aa8.31□□□□□ -1.08
RPB4YJL140W ERG12P07277 443 aa8.31□□□□□ -1.08
RPB4YJL140W YNR021WP53723 404 aaKnown RBP8.31□□□□□ -1.08
RPB4YJL140W SPT16P32558 1035 aaKnown RBP8.29□□□□□ -1.08
RPB4YJL140W TY1A-DR4O74302 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-HP0C2I4 478 aaKnown RBP8.28□□□□□ -1.08
RPB4YJL140W TY1A-AP0CX57 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-PR1P0CX58 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-ORP0CX59 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-PR2P0CX60 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-DR5P0CX65 440 aa8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms