RNA–Protein interactions for RNA: YDR525W

API2, Transcript of Dubious open reading frame, yeast

Gene API2, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
API2	YDR525W	HTA2	P04912	132 aa		6.67	□□□□□ -1.34
API2	YDR525W	IFH1	P39520	1085 aa		6.67	□□□□□ -1.34
API2	YDR525W	YBT1	P32386	1661 aa		6.67	□□□□□ -1.34
API2	YDR525W	GDB1	Q06625	1536 aa		6.66	□□□□□ -1.34
API2	YDR525W	TFG1	P41895	735 aa	Predicted RBP	6.66	□□□□□ -1.34
API2	YDR525W	STH1	P32597	1359 aa		6.65	□□□□□ -1.35
API2	YDR525W	TY3B-G	Q99315	1547 aa		6.65	□□□□□ -1.35
API2	YDR525W	GUT1	P32190	709 aa		6.64	□□□□□ -1.35
API2	YDR525W	PTC3	P34221	468 aa	Known RBP	6.64	□□□□□ -1.35
API2	YDR525W	SET1	P38827	1080 aa	Known RBP	6.64	□□□□□ -1.35
API2	YDR525W	YJL171C	P46992	396 aa		6.64	□□□□□ -1.35
API2	YDR525W	JIP4	Q03361	876 aa		6.64	□□□□□ -1.35
API2	YDR525W	LDB19	Q12502	818 aa		6.64	□□□□□ -1.35
API2	YDR525W	TRP5	P00931	707 aa	Known RBP	6.63	□□□□□ -1.35
API2	YDR525W	DCW1	P36091	449 aa		6.62	□□□□□ -1.35
API2	YDR525W	YNL035C	P53962	389 aa	Known RBP	6.62	□□□□□ -1.35
API2	YDR525W	NUP170	P38181	1502 aa		6.61	□□□□□ -1.35
API2	YDR525W	IOC2	Q12072	812 aa		6.61	□□□□□ -1.35
API2	YDR525W	SEC61	P32915	480 aa		6.6	□□□□□ -1.35
API2	YDR525W	DOP1	Q03921	1698 aa		6.6	□□□□□ -1.35
API2	YDR525W	RTG1	P32607	177 aa		6.59	□□□□□ -1.35
API2	YDR525W	PTC4	P38089	393 aa		6.59	□□□□□ -1.35
API2	YDR525W	PDR10	P51533	1564 aa		6.59	□□□□□ -1.35
API2	YDR525W	EDS1	P38073	919 aa		6.58	□□□□□ -1.36
API2	YDR525W	YEL023C	P39992	682 aa		6.58	□□□□□ -1.36
API2	YDR525W	FKH1	P40466	484 aa		6.58	□□□□□ -1.36
API2	YDR525W	DMA1	P38823	416 aa		6.57	□□□□□ -1.36
API2	YDR525W	NCR1	Q12200	1170 aa		6.57	□□□□□ -1.36
API2	YDR525W	GEA1	P47102	1408 aa	Predicted RBP	6.57	□□□□□ -1.36
API2	YDR525W	CHC1	P22137	1653 aa	Known RBP	6.56	□□□□□ -1.36
API2	YDR525W	DNF2	Q12675	1612 aa		6.56	□□□□□ -1.36
API2	YDR525W	DRS2	P39524	1355 aa		6.54	□□□□□ -1.36
API2	YDR525W	IQG1	Q12280	1495 aa		6.53	□□□□□ -1.36
API2	YDR525W	ARO1	P08566	1588 aa	Known RBP	6.53	□□□□□ -1.36
API2	YDR525W	ITT1	Q04638	464 aa		6.53	□□□□□ -1.36
API2	YDR525W	SAS10	Q12136	610 aa	Predicted RBP	6.53	□□□□□ -1.36
API2	YDR525W	BMT6	Q12291	365 aa		6.53	□□□□□ -1.36
API2	YDR525W	AIR2	Q12476	344 aa	Known RBP	6.53	□□□□□ -1.36
API2	YDR525W	BUD3	P25558	1636 aa		6.52	□□□□□ -1.37
API2	YDR525W	CAT8	P39113	1433 aa		6.51	□□□□□ -1.37
API2	YDR525W	MET10	P39692	1035 aa		6.51	□□□□□ -1.37
API2	YDR525W	NUP157	P40064	1391 aa	Known RBP	6.51	□□□□□ -1.37
API2	YDR525W	TRM3	Q07527	1436 aa		6.5	□□□□□ -1.37
API2	YDR525W	TAF7	Q05021	590 aa		6.5	□□□□□ -1.37
API2	YDR525W	MMS1	Q06211	1407 aa		6.5	□□□□□ -1.37
API2	YDR525W	DAN4	P47179	1161 aa		6.49	□□□□□ -1.37
API2	YDR525W	SEC7	P11075	2009 aa	Known RBP	6.48	□□□□□ -1.37
API2	YDR525W	AI4	P03878	556 aa		6.47	□□□□□ -1.37
API2	YDR525W	RTT106	P40161	455 aa		6.47	□□□□□ -1.37
API2	YDR525W	YGR273C	P53329	174 aa		6.47	□□□□□ -1.37
API2	YDR525W	YDL129W	Q07555	291 aa		6.47	□□□□□ -1.37
API2	YDR525W	CKB1	P43639	278 aa		6.45	□□□□□ -1.38
API2	YDR525W	MPH3	P0CE00	602 aa		6.44	□□□□□ -1.38
API2	YDR525W	RPP1B	P10622	106 aa	Known RBP	6.44	□□□□□ -1.38
API2	YDR525W	YPR148C	Q06523	435 aa		6.44	□□□□□ -1.38
API2	YDR525W	YOR093C	Q12275	1648 aa		6.43	□□□□□ -1.38
API2	YDR525W	YSP2	Q06681	1438 aa		6.43	□□□□□ -1.38
API2	YDR525W	SAP30	P38429	201 aa		6.43	□□□□□ -1.38
API2	YDR525W	VPS70	P47161	811 aa		6.42	□□□□□ -1.38
API2	YDR525W	PEX29	Q03370	554 aa		6.42	□□□□□ -1.38
API2	YDR525W	PML39	Q03760	334 aa		6.42	□□□□□ -1.38
API2	YDR525W	KIC1	P38692	1080 aa		6.41	□□□□□ -1.38
API2	YDR525W	REF2	P42073	533 aa	Predicted RBP	6.4	□□□□□ -1.38
API2	YDR525W	MAK21	Q12176	1025 aa	Known RBP	6.38	□□□□□ -1.39
API2	YDR525W	DNF3	Q12674	1656 aa		6.37	□□□□□ -1.39
API2	YDR525W	SOL3	P38858	249 aa		6.37	□□□□□ -1.39
API2	YDR525W	NST1	P53935	1240 aa		6.37	□□□□□ -1.39
API2	YDR525W	SRB8	P25648	1427 aa		6.36	□□□□□ -1.39
API2	YDR525W	KEX1	P09620	729 aa		6.36	□□□□□ -1.39
API2	YDR525W	CHL1	P22516	861 aa	Predicted RBP	6.36	□□□□□ -1.39
API2	YDR525W	RAD54	P32863	898 aa		6.36	□□□□□ -1.39
API2	YDR525W	VHR2	P40041	505 aa		6.35	□□□□□ -1.39
API2	YDR525W	PRE3	P38624	215 aa		6.34	□□□□□ -1.39
API2	YDR525W	VMR1	P38735	1592 aa		6.34	□□□□□ -1.39
API2	YDR525W	NUP188	P52593	1655 aa	Known RBP	6.33	□□□□□ -1.4
API2	YDR525W	IKI3	Q06706	1349 aa	Known RBP	6.33	□□□□□ -1.4
API2	YDR525W	ELP4	Q02884	456 aa	Known RBP	6.33	□□□□□ -1.4
API2	YDR525W	GCN2	P15442	1659 aa		6.31	□□□□□ -1.4
API2	YDR525W	UBP14	P38237	781 aa	Known RBP	6.31	□□□□□ -1.4
API2	YDR525W	ARH1	P48360	493 aa		6.31	□□□□□ -1.4
API2	YDR525W	YLR326W	Q06170	240 aa	Known RBP	6.31	□□□□□ -1.4
API2	YDR525W	BNR1	P40450	1375 aa		6.31	□□□□□ -1.4
API2	YDR525W	SPB4	P25808	606 aa	Predicted RBP	6.3	□□□□□ -1.4
API2	YDR525W	SLI15	P38283	698 aa		6.3	□□□□□ -1.4
API2	YDR525W	MID1	P41821	548 aa		6.3	□□□□□ -1.4
API2	YDR525W	COX6	P00427	148 aa		6.29	□□□□□ -1.4
API2	YDR525W	DPL1	Q05567	589 aa		6.29	□□□□□ -1.4
API2	YDR525W	SSM4	P40318	1319 aa		6.28	□□□□□ -1.4
API2	YDR525W	HAP5	Q02516	242 aa		6.28	□□□□□ -1.4
API2	YDR525W	PDR5	P33302	1511 aa	Known RBP	6.28	□□□□□ -1.4
API2	YDR525W	HAP1	P0CE41	1502 aa		6.27	□□□□□ -1.41
API2	YDR525W	PBS2	P08018	668 aa		6.27	□□□□□ -1.41
API2	YDR525W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
API2	YDR525W	ILV3	P39522	585 aa	Known RBP	6.27	□□□□□ -1.41
API2	YDR525W	PEX21	P50091	288 aa		6.27	□□□□□ -1.41
API2	YDR525W	MPC54	Q08550	464 aa		6.27	□□□□□ -1.41
API2	YDR525W	IML1	P47170	1584 aa		6.27	□□□□□ -1.41
API2	YDR525W	SPT23	P35210	1082 aa		6.26	□□□□□ -1.41
API2	YDR525W	NMA111	P53920	997 aa		6.25	□□□□□ -1.41
API2	YDR525W	MAM3	Q12296	706 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms