RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W GEA2P39993 1459 aaKnown RBP8.85□□□□□ -0.99
TRR1YDR353W IME2P32581 645 aa8.85□□□□□ -0.99
TRR1YDR353W SAM3Q08986 587 aa8.85□□□□□ -0.99
TRR1YDR353W NOP53Q12080 455 aaKnown RBP8.84□□□□□ -0.99
TRR1YDR353W MIF2P35201 549 aa8.83□□□□□ -1
TRR1YDR353W VPS15P22219 1454 aa8.83□□□□□ -1
TRR1YDR353W SIS1P25294 352 aaKnown RBP8.82□□□□□ -1
TRR1YDR353W RLF2Q12495 606 aa8.82□□□□□ -1
TRR1YDR353W CAT8P39113 1433 aa8.81□□□□□ -1
TRR1YDR353W EDS1P38073 919 aa8.81□□□□□ -1
TRR1YDR353W SET1P38827 1080 aaKnown RBP8.81□□□□□ -1
TRR1YDR353W YBL029C-AQ3E756 94 aa8.81□□□□□ -1
TRR1YDR353W WSC3Q12215 556 aa8.8□□□□□ -1
TRR1YDR353W MSB4Q12317 492 aa8.8□□□□□ -1
TRR1YDR353W PDR10P51533 1564 aa8.8□□□□□ -1
TRR1YDR353W DNF1P32660 1571 aa8.79□□□□□ -1
TRR1YDR353W VNX1P42839 908 aa8.79□□□□□ -1
TRR1YDR353W YOL036WQ08206 761 aa8.78□□□□□ -1
TRR1YDR353W FPR3P38911 411 aaKnown RBP8.77□□□□□ -1.01
TRR1YDR353W PTC3P34221 468 aaKnown RBP8.76□□□□□ -1.01
TRR1YDR353W GCN2P15442 1659 aa8.75□□□□□ -1.01
TRR1YDR353W ARO1P08566 1588 aaKnown RBP8.75□□□□□ -1.01
TRR1YDR353W SRB8P25648 1427 aa8.74□□□□□ -1.01
TRR1YDR353W ABP1P15891 592 aaKnown RBP8.74□□□□□ -1.01
TRR1YDR353W RIX1P38883 763 aaPredicted RBP8.74□□□□□ -1.01
TRR1YDR353W GYP5Q12344 894 aa8.73□□□□□ -1.01
TRR1YDR353W PDR12Q02785 1511 aa8.72□□□□□ -1.01
TRR1YDR353W SET4P42948 560 aa8.72□□□□□ -1.01
TRR1YDR353W YGR130CP53278 816 aa8.72□□□□□ -1.01
TRR1YDR353W GRE2Q12068 342 aaKnown RBP8.72□□□□□ -1.01
TRR1YDR353W EAP1P36041 632 aaKnown RBP8.71□□□□□ -1.02
TRR1YDR353W TIF11P38912 153 aaKnown RBP8.71□□□□□ -1.02
TRR1YDR353W SPP1Q03012 353 aa8.71□□□□□ -1.02
TRR1YDR353W GDB1Q06625 1536 aa8.7□□□□□ -1.02
TRR1YDR353W RTT106P40161 455 aa8.7□□□□□ -1.02
TRR1YDR353W CWC22P53333 577 aaKnown RBP8.7□□□□□ -1.02
TRR1YDR353W YLR419WQ06698 1435 aaKnown RBP8.7□□□□□ -1.02
TRR1YDR353W OPY1P38271 328 aa8.69□□□□□ -1.02
TRR1YDR353W SNF7P39929 240 aaKnown RBP8.69□□□□□ -1.02
TRR1YDR353W NUP159P40477 1460 aa8.69□□□□□ -1.02
TRR1YDR353W SPO14P36126 1683 aa8.69□□□□□ -1.02
TRR1YDR353W YRF1-1P0CX20 1796 aa8.68□□□□□ -1.02
TRR1YDR353W YRF1-5P0CX21 1796 aa8.68□□□□□ -1.02
TRR1YDR353W YRF1-8P0CX22 1796 aa8.68□□□□□ -1.02
TRR1YDR353W GUT1P32190 709 aa8.68□□□□□ -1.02
TRR1YDR353W ATH1P48016 1211 aa8.68□□□□□ -1.02
TRR1YDR353W RPC31P17890 251 aa8.67□□□□□ -1.02
TRR1YDR353W YRB30P53107 440 aaPredicted RBP8.66□□□□□ -1.02
TRR1YDR353W CFT1Q06632 1357 aaKnown RBP8.65□□□□□ -1.02
TRR1YDR353W NUG1P40010 520 aaKnown RBP8.65□□□□□ -1.02
TRR1YDR353W ULI1P43604 169 aa8.65□□□□□ -1.02
TRR1YDR353W PDR5P33302 1511 aaKnown RBP8.64□□□□□ -1.03
TRR1YDR353W RNA1P11745 407 aaKnown RBP8.64□□□□□ -1.03
TRR1YDR353W DEF1P35732 738 aaKnown RBP8.64□□□□□ -1.03
TRR1YDR353W HTA1P04911 132 aaKnown RBP8.63□□□□□ -1.03
TRR1YDR353W HTA2P04912 132 aa8.63□□□□□ -1.03
TRR1YDR353W IQG1Q12280 1495 aa8.63□□□□□ -1.03
TRR1YDR353W DCW1P36091 449 aa8.62□□□□□ -1.03
TRR1YDR353W PAF1P38351 445 aa8.62□□□□□ -1.03
TRR1YDR353W TRP5P00931 707 aaKnown RBP8.61□□□□□ -1.03
TRR1YDR353W MMS1Q06211 1407 aa8.61□□□□□ -1.03
TRR1YDR353W FPR4Q06205 392 aaPredicted RBP8.6□□□□□ -1.03
TRR1YDR353W IOC2Q12072 812 aa8.6□□□□□ -1.03
TRR1YDR353W BUD3P25558 1636 aa8.59□□□□□ -1.03
TRR1YDR353W NUP157P40064 1391 aaKnown RBP8.58□□□□□ -1.04
TRR1YDR353W MET10P39692 1035 aa8.57□□□□□ -1.04
TRR1YDR353W KRI1P42846 591 aaKnown RBP8.57□□□□□ -1.04
TRR1YDR353W VPS70P47161 811 aa8.57□□□□□ -1.04
TRR1YDR353W YSP2Q06681 1438 aa8.56□□□□□ -1.04
TRR1YDR353W YOR093CQ12275 1648 aa8.56□□□□□ -1.04
TRR1YDR353W ROX1P25042 368 aa8.56□□□□□ -1.04
TRR1YDR353W MET5P47169 1442 aa8.55□□□□□ -1.04
TRR1YDR353W FUN12P39730 1002 aaKnown RBP8.55□□□□□ -1.04
TRR1YDR353W CKB1P43639 278 aa8.55□□□□□ -1.04
TRR1YDR353W JIP4Q03361 876 aa8.55□□□□□ -1.04
TRR1YDR353W NOP58Q12499 511 aaKnown RBP8.54□□□□□ -1.04
TRR1YDR353W LDB19Q12502 818 aa8.54□□□□□ -1.04
TRR1YDR353W CHC1P22137 1653 aaKnown RBP8.53□□□□□ -1.04
TRR1YDR353W SEC7P11075 2009 aaKnown RBP8.53□□□□□ -1.04
TRR1YDR353W LEU3P08638 886 aa8.53□□□□□ -1.04
TRR1YDR353W SOL3P38858 249 aa8.53□□□□□ -1.04
TRR1YDR353W YEL023CP39992 682 aa8.53□□□□□ -1.04
TRR1YDR353W YGR273CP53329 174 aa8.53□□□□□ -1.04
TRR1YDR353W NST1P53935 1240 aa8.53□□□□□ -1.04
TRR1YDR353W YIR014WP40570 242 aa8.52□□□□□ -1.05
TRR1YDR353W ENV11P53246 860 aa8.52□□□□□ -1.05
TRR1YDR353W YNL035CP53962 389 aaKnown RBP8.52□□□□□ -1.05
TRR1YDR353W MHP1P43638 1398 aa8.51□□□□□ -1.05
TRR1YDR353W PTC4P38089 393 aa8.51□□□□□ -1.05
TRR1YDR353W HSP82P02829 709 aaKnown RBP8.5□□□□□ -1.05
TRR1YDR353W BUD21Q08492 214 aaPredicted RBP8.5□□□□□ -1.05
TRR1YDR353W EDE1P34216 1381 aa8.49□□□□□ -1.05
TRR1YDR353W RTG1P32607 177 aa8.49□□□□□ -1.05
TRR1YDR353W REF2P42073 533 aaPredicted RBP8.49□□□□□ -1.05
TRR1YDR353W SMC3P47037 1230 aa8.49□□□□□ -1.05
TRR1YDR353W AI4P03878 556 aa8.48□□□□□ -1.05
TRR1YDR353W SEC61P32915 480 aa8.48□□□□□ -1.05
TRR1YDR353W FKH1P40466 484 aa8.48□□□□□ -1.05
TRR1YDR353W DAN4P47179 1161 aa8.48□□□□□ -1.05
TRR1YDR353W NOP7P53261 605 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms