RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W TY1A-NL2Q12470 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-GR2Q12485 440 aa3.69□□□□□ -1.82
SNF5YBR289W ARH1P48360 493 aa3.69□□□□□ -1.82
SNF5YBR289W PDR1P12383 1068 aa3.68□□□□□ -1.82
SNF5YBR289W DPL1Q05567 589 aa3.68□□□□□ -1.82
SNF5YBR289W YPR109WQ06104 294 aa3.68□□□□□ -1.82
SNF5YBR289W STR2P47164 639 aa3.68□□□□□ -1.82
SNF5YBR289W HST2P53686 357 aa3.68□□□□□ -1.82
SNF5YBR289W PEX29Q03370 554 aa3.68□□□□□ -1.82
SNF5YBR289W CSC1Q06538 782 aa3.68□□□□□ -1.82
SNF5YBR289W TEA1P47988 759 aa3.67□□□□□ -1.82
SNF5YBR289W NMA111P53920 997 aa3.67□□□□□ -1.82
SNF5YBR289W YJU3P28321 313 aa3.67□□□□□ -1.82
SNF5YBR289W XDJ1P39102 459 aa3.67□□□□□ -1.82
SNF5YBR289W CSN12P47130 423 aa3.66□□□□□ -1.82
SNF5YBR289W ATF2P53296 535 aa3.66□□□□□ -1.82
SNF5YBR289W TUM1Q08686 304 aaKnown RBP3.66□□□□□ -1.82
SNF5YBR289W KIC1P38692 1080 aa3.65□□□□□ -1.82
SNF5YBR289W TFB4Q12004 338 aa3.65□□□□□ -1.82
SNF5YBR289W BIO2P32451 375 aa3.64□□□□□ -1.83
SNF5YBR289W ESS1P22696 170 aa3.64□□□□□ -1.83
SNF5YBR289W ATG32P40458 529 aa3.64□□□□□ -1.83
SNF5YBR289W SPT23P35210 1082 aa3.64□□□□□ -1.83
SNF5YBR289W ISM1P48526 1002 aa3.64□□□□□ -1.83
SNF5YBR289W HAP5Q02516 242 aa3.64□□□□□ -1.83
SNF5YBR289W BUD20Q08004 166 aaPredicted RBP3.63□□□□□ -1.83
SNF5YBR289W YRR1Q12172 810 aa3.63□□□□□ -1.83
SNF5YBR289W ERG12P07277 443 aa3.63□□□□□ -1.83
SNF5YBR289W ISU2Q12056 156 aa3.63□□□□□ -1.83
SNF5YBR289W SDH2P21801 266 aa3.62□□□□□ -1.83
SNF5YBR289W SUP45P12385 437 aaKnown RBP3.62□□□□□ -1.83
SNF5YBR289W BIM1P40013 344 aa3.62□□□□□ -1.83
SNF5YBR289W RLF2Q12495 606 aa3.62□□□□□ -1.83
SNF5YBR289W KEX2P13134 814 aa3.61□□□□□ -1.83
SNF5YBR289W RAD59Q12223 238 aa3.61□□□□□ -1.83
SNF5YBR289W BNI4P53858 892 aa3.61□□□□□ -1.83
SNF5YBR289W RDS2P19541 446 aaKnown RBP3.6□□□□□ -1.83
SNF5YBR289W CLB5P30283 435 aa3.6□□□□□ -1.83
SNF5YBR289W NUD1P32336 851 aa3.6□□□□□ -1.83
SNF5YBR289W DPS1P04802 557 aaKnown RBP3.6□□□□□ -1.83
SNF5YBR289W YDJ1P25491 409 aaKnown RBP3.6□□□□□ -1.83
SNF5YBR289W TIF1P10081 395 aaKnown RBP3.59□□□□□ -1.83
SNF5YBR289W YPR084WQ06821 456 aa3.59□□□□□ -1.83
SNF5YBR289W PTC2P39966 464 aaKnown RBP3.59□□□□□ -1.83
SNF5YBR289W YML082WQ04533 649 aaKnown RBP3.59□□□□□ -1.83
SNF5YBR289W MRX10Q05648 414 aa3.59□□□□□ -1.83
SNF5YBR289W MMP1Q12372 583 aa3.59□□□□□ -1.83
SNF5YBR289W YNL115CP53925 644 aa3.58□□□□□ -1.84
SNF5YBR289W MOD5P07884 428 aa3.58□□□□□ -1.84
SNF5YBR289W SSA2P10592 639 aaKnown RBP3.58□□□□□ -1.84
SNF5YBR289W RTF1P53064 558 aa3.58□□□□□ -1.84
SNF5YBR289W TUB4P53378 473 aa3.58□□□□□ -1.84
SNF5YBR289W PAC1P39946 494 aaKnown RBP3.57□□□□□ -1.84
SNF5YBR289W TRM1P15565 570 aaKnown RBP3.57□□□□□ -1.84
SNF5YBR289W PKH3Q03306 898 aaPredicted RBP3.57□□□□□ -1.84
SNF5YBR289W MAK16P10962 306 aaPredicted RBP3.56□□□□□ -1.84
SNF5YBR289W APL6P46682 809 aa3.56□□□□□ -1.84
SNF5YBR289W NOB1Q08444 459 aaKnown RBP3.56□□□□□ -1.84
SNF5YBR289W ENO2P00925 437 aaKnown RBP3.56□□□□□ -1.84
SNF5YBR289W YJL007CP47080 104 aa3.56□□□□□ -1.84
SNF5YBR289W RIM21P48565 533 aa3.56□□□□□ -1.84
SNF5YBR289W SUB2Q07478 446 aaKnown RBP3.56□□□□□ -1.84
SNF5YBR289W SLY41P22215 453 aa3.55□□□□□ -1.84
SNF5YBR289W PEP12P32854 288 aa3.55□□□□□ -1.84
SNF5YBR289W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SNF5YBR289W YNL108CP53929 270 aa3.54□□□□□ -1.84
SNF5YBR289W CSE4P36012 229 aa3.53□□□□□ -1.84
SNF5YBR289W TTI1P36097 1038 aa3.53□□□□□ -1.84
SNF5YBR289W BRL1P38770 471 aa3.53□□□□□ -1.84
SNF5YBR289W SRC1Q03707 834 aa3.53□□□□□ -1.84
SNF5YBR289W ENO1P00924 437 aaKnown RBP3.52□□□□□ -1.85
SNF5YBR289W PDC1P06169 563 aaKnown RBP3.52□□□□□ -1.85
SNF5YBR289W PUP1P25043 261 aa3.52□□□□□ -1.85
SNF5YBR289W YML083CQ04526 418 aa3.51□□□□□ -1.85
SNF5YBR289W ARG8P18544 423 aa3.51□□□□□ -1.85
SNF5YBR289W TPD3P31383 635 aa3.51□□□□□ -1.85
SNF5YBR289W PEX21P50091 288 aa3.51□□□□□ -1.85
SNF5YBR289W PUS6P53294 404 aa3.51□□□□□ -1.85
SNF5YBR289W ITT1Q04638 464 aa3.51□□□□□ -1.85
SNF5YBR289W YPR097WQ06839 1073 aa3.51□□□□□ -1.85
SNF5YBR289W YDL206WQ12424 762 aa3.51□□□□□ -1.85
SNF5YBR289W RAS1P01119 309 aa3.5□□□□□ -1.85
SNF5YBR289W FIG4P42837 879 aa3.5□□□□□ -1.85
SNF5YBR289W YMR196WQ04336 1088 aa3.5□□□□□ -1.85
SNF5YBR289W LAM6Q08001 693 aa3.5□□□□□ -1.85
SNF5YBR289W RTG2P32608 588 aaKnown RBP3.5□□□□□ -1.85
SNF5YBR289W YBL036CP38197 257 aa3.5□□□□□ -1.85
SNF5YBR289W PRT1P06103 763 aaKnown RBP3.49□□□□□ -1.85
SNF5YBR289W CPS1P27614 576 aa3.49□□□□□ -1.85
SNF5YBR289W ISF1P32488 338 aa3.49□□□□□ -1.85
SNF5YBR289W RPP1BP10622 106 aaKnown RBP3.49□□□□□ -1.85
SNF5YBR289W RPA14P50106 137 aa3.49□□□□□ -1.85
SNF5YBR289W NAF1P53919 492 aaKnown RBP3.49□□□□□ -1.85
SNF5YBR289W FRA1Q07825 749 aa3.48□□□□□ -1.85
SNF5YBR289W GYP1Q08484 637 aa3.48□□□□□ -1.85
SNF5YBR289W MCM16Q12262 181 aa3.48□□□□□ -1.85
SNF5YBR289W VAC17P25591 423 aa3.48□□□□□ -1.85
SNF5YBR289W TPS3P38426 1054 aaKnown RBP3.48□□□□□ -1.85
SNF5YBR289W HAL5P38970 855 aaKnown RBP3.48□□□□□ -1.85
SNF5YBR289W HXT10P43581 546 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms