RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 NPM1P06748 294 aaKnown RBP eCLIP8.34□□□□□ -1.07
SAMMSON-226ENST00000642089 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
SAMMSON-226ENST00000642089 RUSC2Q8N2Y8 1516 aa8.32□□□□□ -1.08
SAMMSON-226ENST00000642089 IGF1RP08069 1367 aa8.32□□□□□ -1.08
SAMMSON-226ENST00000642089 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
SAMMSON-226ENST00000642089 ERCC6L2Q5T890 1561 aa8.3□□□□□ -1.08
SAMMSON-226ENST00000642089 NUP160Q12769 1436 aa8.3□□□□□ -1.08
SAMMSON-226ENST00000642089 CUL7Q14999 1698 aa8.29□□□□□ -1.08
SAMMSON-226ENST00000642089 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
SAMMSON-226ENST00000642089 MARVELD3Q96A59 401 aa8.28□□□□□ -1.08
SAMMSON-226ENST00000642089 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
SAMMSON-226ENST00000642089 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
SAMMSON-226ENST00000642089 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
SAMMSON-226ENST00000642089 PRG4Q92954 1404 aaPredicted RBP8.26□□□□□ -1.09
SAMMSON-226ENST00000642089 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
SAMMSON-226ENST00000642089 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
SAMMSON-226ENST00000642089 FOXD4L1Q9NU39 408 aa8.26□□□□□ -1.09
SAMMSON-226ENST00000642089 FAM9AQ8IZU1 332 aaPredicted RBP8.25□□□□□ -1.09
SAMMSON-226ENST00000642089 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
SAMMSON-226ENST00000642089 SHROOM2Q13796 1616 aa8.24□□□□□ -1.09
SAMMSON-226ENST00000642089 EMP3P54852 163 aa8.23□□□□□ -1.09
SAMMSON-226ENST00000642089 RTN4Q9NQC3 1192 aaKnown RBP8.23□□□□□ -1.09
SAMMSON-226ENST00000642089 KIAA0586Q9BVV6 1533 aa8.22□□□□□ -1.09
SAMMSON-226ENST00000642089 RAPGEF2Q9Y4G8 1499 aa8.22□□□□□ -1.09
SAMMSON-226ENST00000642089 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
SAMMSON-226ENST00000642089 STAG3Q9UJ98 1225 aa8.22□□□□□ -1.09
SAMMSON-226ENST00000642089 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
SAMMSON-226ENST00000642089 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
SAMMSON-226ENST00000642089 IER5LQ5T953 404 aa8.2□□□□□ -1.1
SAMMSON-226ENST00000642089 BMP2KQ9NSY1 1161 aaPredicted RBP8.2□□□□□ -1.1
SAMMSON-226ENST00000642089 IQGAP2Q13576 1575 aa8.19□□□□□ -1.1
SAMMSON-226ENST00000642089 TIE1P35590 1138 aa8.18□□□□□ -1.1
SAMMSON-226ENST00000642089 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
SAMMSON-226ENST00000642089 HS3ST6Q96QI5 342 aa8.16□□□□□ -1.1
SAMMSON-226ENST00000642089 CTTNBP2Q8WZ74 1663 aa8.16□□□□□ -1.1
SAMMSON-226ENST00000642089 PRXQ9BXM0 1461 aa8.15□□□□□ -1.1
SAMMSON-226ENST00000642089 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
SAMMSON-226ENST00000642089 PTPRGP23470 1445 aa8.14□□□□□ -1.11
SAMMSON-226ENST00000642089 ADCY10Q96PN6 1610 aa8.13□□□□□ -1.11
SAMMSON-226ENST00000642089 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
SAMMSON-226ENST00000642089 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
SAMMSON-226ENST00000642089 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
SAMMSON-226ENST00000642089 UGGT2Q9NYU1 1516 aa8.12□□□□□ -1.11
SAMMSON-226ENST00000642089 EEA1Q15075 1411 aa8.11□□□□□ -1.11
SAMMSON-226ENST00000642089 FAM205CA6NFA0 338 aa8.11□□□□□ -1.11
SAMMSON-226ENST00000642089 MYT1LQ9UL68 1186 aa8.11□□□□□ -1.11
SAMMSON-226ENST00000642089 KIAA0556O60303 1618 aa8.11□□□□□ -1.11
SAMMSON-226ENST00000642089 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
SAMMSON-226ENST00000642089 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
SAMMSON-226ENST00000642089 GOLGA3Q08378 1498 aa8.08□□□□□ -1.12
SAMMSON-226ENST00000642089 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
SAMMSON-226ENST00000642089 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
SAMMSON-226ENST00000642089 PLB1Q6P1J6 1458 aa8.07□□□□□ -1.12
SAMMSON-226ENST00000642089 KIF21BO75037 1637 aa8.07□□□□□ -1.12
SAMMSON-226ENST00000642089 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
SAMMSON-226ENST00000642089 ABCC2Q92887 1545 aa8.06□□□□□ -1.12
SAMMSON-226ENST00000642089 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
SAMMSON-226ENST00000642089 MAPKBP1O60336 1514 aa8.05□□□□□ -1.12
SAMMSON-226ENST00000642089 PLCG2P16885 1265 aa8.05□□□□□ -1.12
SAMMSON-226ENST00000642089 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 FHOD3Q2V2M9 1422 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 PTGER2P43116 358 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 KIF12Q96FN5 646 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 UHRF1BP1LA0JNW5 1464 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 ABCC10Q5T3U5 1492 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 TSPOAP1O95153 1857 aa8.03□□□□□ -1.12
SAMMSON-226ENST00000642089 POTEB3A0JP26 581 aa8.02□□□□□ -1.13
SAMMSON-226ENST00000642089 TTLL13PA6NNM8 815 aa8.02□□□□□ -1.13
SAMMSON-226ENST00000642089 POTEBQ6S5H4 581 aa8.02□□□□□ -1.13
SAMMSON-226ENST00000642089 ABCA8O94911 1581 aa8.01□□□□□ -1.13
SAMMSON-226ENST00000642089 KDM5BQ9UGL1 1544 aa8.01□□□□□ -1.13
SAMMSON-226ENST00000642089 KCNH8Q96L42 1107 aa8.01□□□□□ -1.13
SAMMSON-226ENST00000642089 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
SAMMSON-226ENST00000642089 TRIM35Q9UPQ4 493 aa8□□□□□ -1.13
SAMMSON-226ENST00000642089 RAPGEF6Q8TEU7 1601 aa7.98□□□□□ -1.13
SAMMSON-226ENST00000642089 TSPYL2Q9H2G4 693 aaPredicted RBP7.97□□□□□ -1.13
SAMMSON-226ENST00000642089 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
SAMMSON-226ENST00000642089 EFCAB5A4FU69 1503 aa7.97□□□□□ -1.13
SAMMSON-226ENST00000642089 WDR7Q9Y4E6 1490 aa7.97□□□□□ -1.13
SAMMSON-226ENST00000642089 EPRSP07814 1512 aaKnown RBP7.97□□□□□ -1.13
SAMMSON-226ENST00000642089 TRPC6Q9Y210 931 aa7.96□□□□□ -1.14
SAMMSON-226ENST00000642089 ATP10BO94823 1461 aa7.96□□□□□ -1.14
SAMMSON-226ENST00000642089 ARHGAP35Q9NRY4 1499 aa7.96□□□□□ -1.14
SAMMSON-226ENST00000642089 MNX1P50219 401 aaPredicted RBP7.95□□□□□ -1.14
SAMMSON-226ENST00000642089 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
SAMMSON-226ENST00000642089 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
SAMMSON-226ENST00000642089 KDM6BO15054 1643 aa7.94□□□□□ -1.14
SAMMSON-226ENST00000642089 PPRC1Q5VV67 1664 aaKnown RBP7.94□□□□□ -1.14
SAMMSON-226ENST00000642089 GLI2P10070 1586 aa7.94□□□□□ -1.14
SAMMSON-226ENST00000642089 MAP3K4Q9Y6R4 1608 aa7.93□□□□□ -1.14
SAMMSON-226ENST00000642089 CDK13Q14004 1512 aaKnown RBP7.93□□□□□ -1.14
SAMMSON-226ENST00000642089 LOC105371045A0A1W2PR82 267 aa7.93□□□□□ -1.14
SAMMSON-226ENST00000642089 ZBTB22O15209 634 aa7.92□□□□□ -1.14
SAMMSON-226ENST00000642089 CLIP1P30622 1438 aa7.91□□□□□ -1.14
SAMMSON-226ENST00000642089 FMN1Q68DA7 1419 aa7.91□□□□□ -1.14
SAMMSON-226ENST00000642089 CD109Q6YHK3 1445 aa7.91□□□□□ -1.14
SAMMSON-226ENST00000642089 PLEKHD1A6NEE1 506 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms