RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 ZMYM4Q5VZL5 1548 aa24.15■■□□□ 1.46
SRRT-219ENST00000641476 FMN1Q68DA7 1419 aa24.15■■□□□ 1.46
SRRT-219ENST00000641476 CFAP74Q9C0B2 1584 aa24.15■■□□□ 1.46
SRRT-219ENST00000641476 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
SRRT-219ENST00000641476 MAGI2Q86UL8 1455 aa24.09■■□□□ 1.45
SRRT-219ENST00000641476 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
SRRT-219ENST00000641476 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
SRRT-219ENST00000641476 FER1L4A9Z1Z3 1794 aa24.05■■□□□ 1.44
SRRT-219ENST00000641476 KIF14Q15058 1648 aa24.02■■□□□ 1.44
SRRT-219ENST00000641476 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
SRRT-219ENST00000641476 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
SRRT-219ENST00000641476 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
SRRT-219ENST00000641476 CEBPAP49715 358 aaPredicted RBP24■■□□□ 1.43
SRRT-219ENST00000641476 PLCH2O75038 1416 aa24■■□□□ 1.43
SRRT-219ENST00000641476 ATP10AO60312 1499 aa24■■□□□ 1.43
SRRT-219ENST00000641476 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
SRRT-219ENST00000641476 ILDR2Q71H61 639 aa23.98■■□□□ 1.43
SRRT-219ENST00000641476 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
SRRT-219ENST00000641476 TROQ12816 1431 aaPredicted RBP23.95■■□□□ 1.42
SRRT-219ENST00000641476 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.42
SRRT-219ENST00000641476 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
SRRT-219ENST00000641476 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
SRRT-219ENST00000641476 EFCAB2Q5VUJ9 269 aa23.91■■□□□ 1.42
SRRT-219ENST00000641476 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
SRRT-219ENST00000641476 CLIP1P30622 1438 aa23.91■■□□□ 1.42
SRRT-219ENST00000641476 SOCS7O14512 581 aa23.9■■□□□ 1.42
SRRT-219ENST00000641476 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
SRRT-219ENST00000641476 CDK11AQ9UQ88 783 aaPredicted RBP23.89■■□□□ 1.41
SRRT-219ENST00000641476 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
SRRT-219ENST00000641476 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
SRRT-219ENST00000641476 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
SRRT-219ENST00000641476 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
SRRT-219ENST00000641476 AFAP1Q8N556 730 aa23.85■■□□□ 1.41
SRRT-219ENST00000641476 STRCQ7RTU9 1775 aa23.85■■□□□ 1.41
SRRT-219ENST00000641476 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
SRRT-219ENST00000641476 CDC42BPBQ9Y5S2 1711 aa23.82■■□□□ 1.4
SRRT-219ENST00000641476 KDM5CP41229 1560 aa23.8■■□□□ 1.4
SRRT-219ENST00000641476 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
SRRT-219ENST00000641476 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
SRRT-219ENST00000641476 PTPRTO14522 1441 aa23.77■■□□□ 1.4
SRRT-219ENST00000641476 CDC42BPAQ5VT25 1732 aa23.76■■□□□ 1.39
SRRT-219ENST00000641476 ABCC1P33527 1531 aa23.76■■□□□ 1.39
SRRT-219ENST00000641476 ESF1Q9H501 851 aaKnown RBP23.76■■□□□ 1.39
SRRT-219ENST00000641476 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
SRRT-219ENST00000641476 REREQ9P2R6 1566 aa23.72■■□□□ 1.39
SRRT-219ENST00000641476 ABCA6Q8N139 1617 aa23.72■■□□□ 1.39
SRRT-219ENST00000641476 C3P01024 1663 aa23.71■■□□□ 1.39
SRRT-219ENST00000641476 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
SRRT-219ENST00000641476 MLH3Q9UHC1 1453 aa23.7■■□□□ 1.38
SRRT-219ENST00000641476 TRAPPC8Q9Y2L5 1435 aa23.7■■□□□ 1.38
SRRT-219ENST00000641476 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
SRRT-219ENST00000641476 AGLP35573 1532 aa23.66■■□□□ 1.38
SRRT-219ENST00000641476 SETD1BQ9UPS6 1966 aaKnown RBP23.66■■□□□ 1.38
SRRT-219ENST00000641476 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
SRRT-219ENST00000641476 SAMD9LQ8IVG5 1584 aa23.64■■□□□ 1.37
SRRT-219ENST00000641476 IQSEC2Q5JU85 1478 aa23.63■■□□□ 1.37
SRRT-219ENST00000641476 CNTLNQ9NXG0 1405 aa23.62■■□□□ 1.37
SRRT-219ENST00000641476 SYCP2Q9BX26 1530 aa23.6■■□□□ 1.37
SRRT-219ENST00000641476 GPATCH8Q9UKJ3 1502 aaKnown RBP23.6■■□□□ 1.37
SRRT-219ENST00000641476 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
SRRT-219ENST00000641476 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
SRRT-219ENST00000641476 EHBP1L1Q8N3D4 1523 aa23.59■■□□□ 1.37
SRRT-219ENST00000641476 NCKAP5LQ9HCH0 1330 aa23.56■■□□□ 1.36
SRRT-219ENST00000641476 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
SRRT-219ENST00000641476 NPATQ14207 1427 aa23.55■■□□□ 1.36
SRRT-219ENST00000641476 TIAM1Q13009 1591 aa23.55■■□□□ 1.36
SRRT-219ENST00000641476 ZNF335Q9H4Z2 1342 aaPredicted RBP23.55■■□□□ 1.36
SRRT-219ENST00000641476 UBAP1LF5GYI3 381 aa23.54■■□□□ 1.36
SRRT-219ENST00000641476 ZMYM3Q14202 1370 aa23.52■■□□□ 1.36
SRRT-219ENST00000641476 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
SRRT-219ENST00000641476 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
SRRT-219ENST00000641476 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
SRRT-219ENST00000641476 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
SRRT-219ENST00000641476 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
SRRT-219ENST00000641476 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
SRRT-219ENST00000641476 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
SRRT-219ENST00000641476 MROH2AA6NES4 1674 aa23.47■■□□□ 1.35
SRRT-219ENST00000641476 PKD2Q13563 968 aa23.44■■□□□ 1.34
SRRT-219ENST00000641476 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
SRRT-219ENST00000641476 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
SRRT-219ENST00000641476 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
SRRT-219ENST00000641476 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.34
SRRT-219ENST00000641476 CFDP1Q9UEE9 299 aaPredicted RBP23.43■■□□□ 1.34
SRRT-219ENST00000641476 MYO3AQ8NEV4 1616 aa23.43■■□□□ 1.34
SRRT-219ENST00000641476 CEP170BQ9Y4F5 1589 aaPredicted RBP23.41■■□□□ 1.34
SRRT-219ENST00000641476 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
SRRT-219ENST00000641476 TCOF1Q13428 1488 aaKnown RBP23.4■■□□□ 1.34
SRRT-219ENST00000641476 CLTCQ00610 1675 aaKnown RBP23.4■■□□□ 1.34
SRRT-219ENST00000641476 GGT6Q6P531 493 aa23.39■■□□□ 1.33
SRRT-219ENST00000641476 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
SRRT-219ENST00000641476 VPS8Q8N3P4 1428 aa23.39■■□□□ 1.33
SRRT-219ENST00000641476 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
SRRT-219ENST00000641476 A2MP01023 1474 aa23.38■■□□□ 1.33
SRRT-219ENST00000641476 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
SRRT-219ENST00000641476 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
SRRT-219ENST00000641476 ADGBQ8N7X0 1667 aa23.37■■□□□ 1.33
SRRT-219ENST00000641476 MBD5Q9P267 1494 aa23.36■■□□□ 1.33
SRRT-219ENST00000641476 CAMSAP2Q08AD1 1489 aa23.33■■□□□ 1.33
SRRT-219ENST00000641476 HSPA1LP34931 641 aa23.33■■□□□ 1.33
SRRT-219ENST00000641476 PIP4K2BP78356 416 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms