RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
CASC19-230ENST00000641421 CAMSAP2Q08AD1 1489 aa15.45■□□□□ 0.06
CASC19-230ENST00000641421 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
CASC19-230ENST00000641421 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
CASC19-230ENST00000641421 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
CASC19-230ENST00000641421 ERCC6L2Q5T890 1561 aa15.43■□□□□ 0.06
CASC19-230ENST00000641421 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
CASC19-230ENST00000641421 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
CASC19-230ENST00000641421 KDM6BO15054 1643 aa15.4■□□□□ 0.06
CASC19-230ENST00000641421 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
CASC19-230ENST00000641421 ABCC2Q92887 1545 aa15.4■□□□□ 0.06
CASC19-230ENST00000641421 CDC42BPAQ5VT25 1732 aa15.39■□□□□ 0.05
CASC19-230ENST00000641421 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
CASC19-230ENST00000641421 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
CASC19-230ENST00000641421 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
CASC19-230ENST00000641421 TONSLQ96HA7 1378 aa15.35■□□□□ 0.05
CASC19-230ENST00000641421 PPP1R15AO75807 674 aaPredicted RBP15.34■□□□□ 0.05
CASC19-230ENST00000641421 UHRF1BP1LA0JNW5 1464 aa15.34■□□□□ 0.05
CASC19-230ENST00000641421 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
CASC19-230ENST00000641421 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.05
CASC19-230ENST00000641421 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
CASC19-230ENST00000641421 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
CASC19-230ENST00000641421 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
CASC19-230ENST00000641421 PREX2Q70Z35 1606 aa15.31■□□□□ 0.04
CASC19-230ENST00000641421 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
CASC19-230ENST00000641421 C9orf84Q5VXU9 1444 aa15.28■□□□□ 0.04
CASC19-230ENST00000641421 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
CASC19-230ENST00000641421 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
CASC19-230ENST00000641421 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
CASC19-230ENST00000641421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.04
CASC19-230ENST00000641421 TTC37Q6PGP7 1564 aa15.27■□□□□ 0.03
CASC19-230ENST00000641421 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.03
CASC19-230ENST00000641421 TSPY4P0CV99 314 aa15.27■□□□□ 0.03
CASC19-230ENST00000641421 TSPY10P0CW01 314 aa15.27■□□□□ 0.03
CASC19-230ENST00000641421 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.03
CASC19-230ENST00000641421 MIER1Q8N108 512 aa15.27■□□□□ 0.03
CASC19-230ENST00000641421 MBD5Q9P267 1494 aa15.26■□□□□ 0.03
CASC19-230ENST00000641421 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
CASC19-230ENST00000641421 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
CASC19-230ENST00000641421 ARHGAP5Q13017 1502 aa15.25■□□□□ 0.03
CASC19-230ENST00000641421 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
CASC19-230ENST00000641421 KCNH8Q96L42 1107 aa15.24■□□□□ 0.03
CASC19-230ENST00000641421 ANKRD50Q9ULJ7 1429 aa15.24■□□□□ 0.03
CASC19-230ENST00000641421 PZPP20742 1482 aa15.23■□□□□ 0.03
CASC19-230ENST00000641421 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
CASC19-230ENST00000641421 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
CASC19-230ENST00000641421 PLEKHH2Q8IVE3 1493 aa15.22■□□□□ 0.03
CASC19-230ENST00000641421 FOXD1Q16676 465 aa15.22■□□□□ 0.03
CASC19-230ENST00000641421 SYCP2Q9BX26 1530 aa15.2■□□□□ 0.02
CASC19-230ENST00000641421 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
CASC19-230ENST00000641421 PLCH2O75038 1416 aa15.19■□□□□ 0.02
CASC19-230ENST00000641421 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
CASC19-230ENST00000641421 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
CASC19-230ENST00000641421 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
CASC19-230ENST00000641421 MAST1Q9Y2H9 1570 aa15.17■□□□□ 0.02
CASC19-230ENST00000641421 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
CASC19-230ENST00000641421 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
CASC19-230ENST00000641421 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
CASC19-230ENST00000641421 L3MBTL2Q969R5 705 aa15.15■□□□□ 0.02
CASC19-230ENST00000641421 NUP155O75694 1391 aa15.15■□□□□ 0.02
CASC19-230ENST00000641421 PKD2Q13563 968 aa15.14■□□□□ 0.01
CASC19-230ENST00000641421 WDR7Q9Y4E6 1490 aa15.14■□□□□ 0.01
CASC19-230ENST00000641421 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
CASC19-230ENST00000641421 ARHGEF12Q9NZN5 1544 aa15.11■□□□□ 0.01
CASC19-230ENST00000641421 TEX14Q8IWB6 1497 aa15.11■□□□□ 0.01
CASC19-230ENST00000641421 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
CASC19-230ENST00000641421 ABCC1P33527 1531 aa15.11■□□□□ 0.01
CASC19-230ENST00000641421 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CASC19-230ENST00000641421 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0.01
CASC19-230ENST00000641421 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
CASC19-230ENST00000641421 ASXL2Q76L83 1435 aa15.07■□□□□ 0
CASC19-230ENST00000641421 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
CASC19-230ENST00000641421 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
CASC19-230ENST00000641421 TRAPPC8Q9Y2L5 1435 aa15.06■□□□□ 0
CASC19-230ENST00000641421 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
CASC19-230ENST00000641421 UNC13BO14795 1591 aa15.05■□□□□ 0
CASC19-230ENST00000641421 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
CASC19-230ENST00000641421 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
CASC19-230ENST00000641421 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
CASC19-230ENST00000641421 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
CASC19-230ENST00000641421 ERBINQ96RT1 1412 aa15.04■□□□□ -0
CASC19-230ENST00000641421 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
CASC19-230ENST00000641421 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
CASC19-230ENST00000641421 FANCAO15360 1455 aa15.02□□□□□ -0.01
CASC19-230ENST00000641421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
CASC19-230ENST00000641421 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
CASC19-230ENST00000641421 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
CASC19-230ENST00000641421 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
CASC19-230ENST00000641421 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
CASC19-230ENST00000641421 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
CASC19-230ENST00000641421 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
CASC19-230ENST00000641421 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
CASC19-230ENST00000641421 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
CASC19-230ENST00000641421 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
CASC19-230ENST00000641421 ANP32CO43423 234 aa14.94□□□□□ -0.02
CASC19-230ENST00000641421 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
CASC19-230ENST00000641421 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
CASC19-230ENST00000641421 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
CASC19-230ENST00000641421 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
CASC19-230ENST00000641421 SPATA31E1Q6ZUB1 1445 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms