RNA–Protein interactions for RNA: ENST00000641414.1

CASC19-228, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-228ENST00000641414 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
CASC19-228ENST00000641414 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
CASC19-228ENST00000641414 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
CASC19-228ENST00000641414 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
CASC19-228ENST00000641414 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
CASC19-228ENST00000641414 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
CASC19-228ENST00000641414 CLSPNQ9HAW4 1339 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 DHX57Q6P158 1386 aaKnown RBP9.73□□□□□ -0.85
CASC19-228ENST00000641414 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 CAMSAP2Q08AD1 1489 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 ABCC10Q5T3U5 1492 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
CASC19-228ENST00000641414 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
CASC19-228ENST00000641414 CNKSR2Q8WXI2 1034 aa9.72□□□□□ -0.85
CASC19-228ENST00000641414 DAPK1P53355 1430 aa9.72□□□□□ -0.85
CASC19-228ENST00000641414 CDC42BPAQ5VT25 1732 aa9.72□□□□□ -0.85
CASC19-228ENST00000641414 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.85
CASC19-228ENST00000641414 DNMT1P26358 1616 aaKnown RBP9.71□□□□□ -0.86
CASC19-228ENST00000641414 NAIPQ13075 1403 aa9.7□□□□□ -0.86
CASC19-228ENST00000641414 ABCC5O15440 1437 aa9.69□□□□□ -0.86
CASC19-228ENST00000641414 AKNAQ7Z591 1439 aa9.69□□□□□ -0.86
CASC19-228ENST00000641414 KCNA4P22459 653 aa9.69□□□□□ -0.86
CASC19-228ENST00000641414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.69□□□□□ -0.86
CASC19-228ENST00000641414 ROCK1Q13464 1354 aa9.68□□□□□ -0.86
CASC19-228ENST00000641414 PREX2Q70Z35 1606 aa9.68□□□□□ -0.86
CASC19-228ENST00000641414 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
CASC19-228ENST00000641414 ARHGAP5Q13017 1502 aa9.68□□□□□ -0.86
CASC19-228ENST00000641414 WDR7Q9Y4E6 1490 aa9.68□□□□□ -0.86
CASC19-228ENST00000641414 TSPY4P0CV99 314 aa9.67□□□□□ -0.86
CASC19-228ENST00000641414 TSPY10P0CW01 314 aa9.67□□□□□ -0.86
CASC19-228ENST00000641414 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
CASC19-228ENST00000641414 ACIN1Q9UKV3 1341 aaKnown RBP9.67□□□□□ -0.86
CASC19-228ENST00000641414 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
CASC19-228ENST00000641414 GCC2Q8IWJ2 1684 aa9.66□□□□□ -0.86
CASC19-228ENST00000641414 CDC42BPBQ9Y5S2 1711 aa9.66□□□□□ -0.86
CASC19-228ENST00000641414 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
CASC19-228ENST00000641414 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
CASC19-228ENST00000641414 HNRNPMP52272 730 aaKnown RBP eCLIP9.65□□□□□ -0.86
CASC19-228ENST00000641414 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
CASC19-228ENST00000641414 ASXL2Q76L83 1435 aa9.65□□□□□ -0.86
CASC19-228ENST00000641414 PLEKHH2Q8IVE3 1493 aa9.65□□□□□ -0.87
CASC19-228ENST00000641414 PLCH2O75038 1416 aa9.64□□□□□ -0.87
CASC19-228ENST00000641414 SAMD9LQ8IVG5 1584 aa9.64□□□□□ -0.87
CASC19-228ENST00000641414 CYB5RLQ6IPT4 315 aa9.64□□□□□ -0.87
CASC19-228ENST00000641414 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
CASC19-228ENST00000641414 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
CASC19-228ENST00000641414 SHANK2Q9UPX8 1470 aa9.63□□□□□ -0.87
CASC19-228ENST00000641414 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
CASC19-228ENST00000641414 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
CASC19-228ENST00000641414 CCDC141Q6ZP82 1450 aa9.63□□□□□ -0.87
CASC19-228ENST00000641414 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
CASC19-228ENST00000641414 ADGRL2O95490 1459 aa9.62□□□□□ -0.87
CASC19-228ENST00000641414 MAPKBP1O60336 1514 aa9.62□□□□□ -0.87
CASC19-228ENST00000641414 SYCP2Q9BX26 1530 aa9.62□□□□□ -0.87
CASC19-228ENST00000641414 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
CASC19-228ENST00000641414 KIAA1107Q9UPP5 1409 aa9.61□□□□□ -0.87
CASC19-228ENST00000641414 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
CASC19-228ENST00000641414 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
CASC19-228ENST00000641414 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
CASC19-228ENST00000641414 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
CASC19-228ENST00000641414 NEUROD1Q13562 356 aa9.6□□□□□ -0.87
CASC19-228ENST00000641414 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
CASC19-228ENST00000641414 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.87
CASC19-228ENST00000641414 KDM6BO15054 1643 aa9.59□□□□□ -0.87
CASC19-228ENST00000641414 KIF15Q9NS87 1388 aa9.59□□□□□ -0.88
CASC19-228ENST00000641414 FANCAO15360 1455 aa9.58□□□□□ -0.88
CASC19-228ENST00000641414 MPHOSPH9Q99550 1183 aa9.58□□□□□ -0.88
CASC19-228ENST00000641414 ABCC1P33527 1531 aa9.57□□□□□ -0.88
CASC19-228ENST00000641414 SIN3AQ96ST3 1273 aa9.57□□□□□ -0.88
CASC19-228ENST00000641414 NPM3O75607 178 aaKnown RBP9.56□□□□□ -0.88
CASC19-228ENST00000641414 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
CASC19-228ENST00000641414 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
CASC19-228ENST00000641414 MAST1Q9Y2H9 1570 aa9.56□□□□□ -0.88
CASC19-228ENST00000641414 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
CASC19-228ENST00000641414 MYT1LQ9UL68 1186 aa9.55□□□□□ -0.88
CASC19-228ENST00000641414 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
CASC19-228ENST00000641414 ADGRL1O94910 1474 aa9.55□□□□□ -0.88
CASC19-228ENST00000641414 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
CASC19-228ENST00000641414 RNF216Q9NWF9 866 aaPredicted RBP9.54□□□□□ -0.88
CASC19-228ENST00000641414 TONSLQ96HA7 1378 aa9.54□□□□□ -0.88
CASC19-228ENST00000641414 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
CASC19-228ENST00000641414 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
CASC19-228ENST00000641414 NUP155O75694 1391 aa9.53□□□□□ -0.88
CASC19-228ENST00000641414 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
CASC19-228ENST00000641414 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
CASC19-228ENST00000641414 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
CASC19-228ENST00000641414 PLXNC1O60486 1568 aa9.52□□□□□ -0.89
CASC19-228ENST00000641414 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
CASC19-228ENST00000641414 DUOX2Q9NRD8 1548 aa9.51□□□□□ -0.89
CASC19-228ENST00000641414 HOXD11P31277 338 aaPredicted RBP9.51□□□□□ -0.89
CASC19-228ENST00000641414 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
CASC19-228ENST00000641414 PZPP20742 1482 aa9.49□□□□□ -0.89
CASC19-228ENST00000641414 ERBINQ96RT1 1412 aa9.49□□□□□ -0.89
CASC19-228ENST00000641414 PKD2Q13563 968 aa9.49□□□□□ -0.89
CASC19-228ENST00000641414 ZNF518AQ6AHZ1 1483 aa9.49□□□□□ -0.89
CASC19-228ENST00000641414 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
CASC19-228ENST00000641414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.48□□□□□ -0.89
CASC19-228ENST00000641414 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
CASC19-228ENST00000641414 ZFYVE16Q7Z3T8 1539 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms