RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
PHGDH-216ENST00000641375 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
PHGDH-216ENST00000641375 ABCC5O15440 1437 aa24.15■■□□□ 1.46
PHGDH-216ENST00000641375 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
PHGDH-216ENST00000641375 CHIC2Q9UKJ5 165 aa24.13■■□□□ 1.45
PHGDH-216ENST00000641375 MAPKBP1O60336 1514 aa24.13■■□□□ 1.45
PHGDH-216ENST00000641375 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
PHGDH-216ENST00000641375 ZNF777Q9ULD5 760 aaPredicted RBP24.11■■□□□ 1.45
PHGDH-216ENST00000641375 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
PHGDH-216ENST00000641375 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
PHGDH-216ENST00000641375 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
PHGDH-216ENST00000641375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.09■■□□□ 1.456e-6■■■■■ 38.2
PHGDH-216ENST00000641375 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.45
PHGDH-216ENST00000641375 ADGBQ8N7X0 1667 aa24.08■■□□□ 1.45
PHGDH-216ENST00000641375 TTC37Q6PGP7 1564 aa24.07■■□□□ 1.44
PHGDH-216ENST00000641375 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
PHGDH-216ENST00000641375 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
PHGDH-216ENST00000641375 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
PHGDH-216ENST00000641375 ARHGEF5Q12774 1597 aa24.02■■□□□ 1.44
PHGDH-216ENST00000641375 SAMD9LQ8IVG5 1584 aa24■■□□□ 1.43
PHGDH-216ENST00000641375 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
PHGDH-216ENST00000641375 KCNH8Q96L42 1107 aa23.99■■□□□ 1.43
PHGDH-216ENST00000641375 NCOA1Q15788 1441 aa23.99■■□□□ 1.43
PHGDH-216ENST00000641375 KDM6BO15054 1643 aa23.98■■□□□ 1.43
PHGDH-216ENST00000641375 WDR7Q9Y4E6 1490 aa23.97■■□□□ 1.43
PHGDH-216ENST00000641375 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
PHGDH-216ENST00000641375 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
PHGDH-216ENST00000641375 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
PHGDH-216ENST00000641375 PLEKHH2Q8IVE3 1493 aa23.95■■□□□ 1.42
PHGDH-216ENST00000641375 PLCH2O75038 1416 aa23.94■■□□□ 1.42
PHGDH-216ENST00000641375 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
PHGDH-216ENST00000641375 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
PHGDH-216ENST00000641375 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
PHGDH-216ENST00000641375 CCDC141Q6ZP82 1450 aa23.93■■□□□ 1.42
PHGDH-216ENST00000641375 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
PHGDH-216ENST00000641375 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
PHGDH-216ENST00000641375 ARAP3Q8WWN8 1544 aa23.91■■□□□ 1.42
PHGDH-216ENST00000641375 KIAA1107Q9UPP5 1409 aa23.91■■□□□ 1.42
PHGDH-216ENST00000641375 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.421e-6■■■■□ 22.8
PHGDH-216ENST00000641375 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.42
PHGDH-216ENST00000641375 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
PHGDH-216ENST00000641375 EFCAB2Q5VUJ9 269 aa23.87■■□□□ 1.41
PHGDH-216ENST00000641375 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
PHGDH-216ENST00000641375 ABCA9Q8IUA7 1624 aa23.86■■□□□ 1.41
PHGDH-216ENST00000641375 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
PHGDH-216ENST00000641375 ZNF316A6NFI3 1004 aaPredicted RBP23.85■■□□□ 1.41
PHGDH-216ENST00000641375 MAST1Q9Y2H9 1570 aa23.85■■□□□ 1.41
PHGDH-216ENST00000641375 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
PHGDH-216ENST00000641375 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
PHGDH-216ENST00000641375 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.41
PHGDH-216ENST00000641375 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
PHGDH-216ENST00000641375 ABCC1P33527 1531 aa23.8■■□□□ 1.4
PHGDH-216ENST00000641375 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
PHGDH-216ENST00000641375 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.39
PHGDH-216ENST00000641375 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
PHGDH-216ENST00000641375 TONSLQ96HA7 1378 aa23.74■■□□□ 1.39
PHGDH-216ENST00000641375 SLC4A1APQ9BWU0 796 aaKnown RBP23.74■■□□□ 1.39
PHGDH-216ENST00000641375 FANCAO15360 1455 aa23.73■■□□□ 1.39
PHGDH-216ENST00000641375 PZPP20742 1482 aa23.72■■□□□ 1.39
PHGDH-216ENST00000641375 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
PHGDH-216ENST00000641375 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
PHGDH-216ENST00000641375 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
PHGDH-216ENST00000641375 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
PHGDH-216ENST00000641375 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
PHGDH-216ENST00000641375 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
PHGDH-216ENST00000641375 ANKRD30BQ9BXX2 1392 aa23.66■■□□□ 1.38
PHGDH-216ENST00000641375 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
PHGDH-216ENST00000641375 DUOX2Q9NRD8 1548 aa23.66■■□□□ 1.38
PHGDH-216ENST00000641375 RTEL1-TNFRSF6BF6WH68 1400 aa23.65■■□□□ 1.38
PHGDH-216ENST00000641375 NUP155O75694 1391 aa23.65■■□□□ 1.38
PHGDH-216ENST00000641375 CFAP74Q9C0B2 1584 aa23.64■■□□□ 1.38
PHGDH-216ENST00000641375 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
PHGDH-216ENST00000641375 ADGRL1O94910 1474 aa23.63■■□□□ 1.37
PHGDH-216ENST00000641375 FOXD1Q16676 465 aa23.62■■□□□ 1.37
PHGDH-216ENST00000641375 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
PHGDH-216ENST00000641375 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
PHGDH-216ENST00000641375 MYT1Q01538 1121 aa23.61■■□□□ 1.37
PHGDH-216ENST00000641375 SPAG9O60271 1321 aaKnown RBP23.61■■□□□ 1.37
PHGDH-216ENST00000641375 UNC13BO14795 1591 aa23.6■■□□□ 1.37
PHGDH-216ENST00000641375 RPRD2Q5VT52 1461 aaKnown RBP23.6■■□□□ 1.37
PHGDH-216ENST00000641375 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
PHGDH-216ENST00000641375 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
PHGDH-216ENST00000641375 PKD2Q13563 968 aa23.58■■□□□ 1.36
PHGDH-216ENST00000641375 AFAP1Q8N556 730 aa23.57■■□□□ 1.36
PHGDH-216ENST00000641375 INO80Q9ULG1 1556 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-216ENST00000641375 FAM135AQ9P2D6 1515 aa23.55■■□□□ 1.36
PHGDH-216ENST00000641375 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
PHGDH-216ENST00000641375 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
PHGDH-216ENST00000641375 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
PHGDH-216ENST00000641375 MAGI2Q86UL8 1455 aa23.51■■□□□ 1.35
PHGDH-216ENST00000641375 GLI2P10070 1586 aa23.49■■□□□ 1.35
PHGDH-216ENST00000641375 NEO1Q92859 1461 aa23.49■■□□□ 1.35
PHGDH-216ENST00000641375 MAP3K4Q9Y6R4 1608 aa23.49■■□□□ 1.35
PHGDH-216ENST00000641375 TEX14Q8IWB6 1497 aa23.47■■□□□ 1.35
PHGDH-216ENST00000641375 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
PHGDH-216ENST00000641375 POGZQ7Z3K3 1410 aa23.45■■□□□ 1.34
PHGDH-216ENST00000641375 KDM5CP41229 1560 aa23.44■■□□□ 1.34
PHGDH-216ENST00000641375 KIDINS220Q9ULH0 1771 aa23.44■■□□□ 1.34
PHGDH-216ENST00000641375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.345e-16■■□□□ 13.6
PHGDH-216ENST00000641375 MYT1LQ9UL68 1186 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms