RNA–Protein interactions for RNA: ENST00000641029.1

CASC19-207, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,047 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-207ENST00000641029 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
CASC19-207ENST00000641029 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.33
CASC19-207ENST00000641029 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
CASC19-207ENST00000641029 ERBB3P21860 1342 aa12.91□□□□□ -0.34
CASC19-207ENST00000641029 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
CASC19-207ENST00000641029 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
CASC19-207ENST00000641029 CC2D2AQ9P2K1 1620 aa12.9□□□□□ -0.34
CASC19-207ENST00000641029 SOX12O15370 315 aa12.89□□□□□ -0.35
CASC19-207ENST00000641029 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
CASC19-207ENST00000641029 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
CASC19-207ENST00000641029 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
CASC19-207ENST00000641029 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
CASC19-207ENST00000641029 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
CASC19-207ENST00000641029 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
CASC19-207ENST00000641029 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
CASC19-207ENST00000641029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
CASC19-207ENST00000641029 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
CASC19-207ENST00000641029 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
CASC19-207ENST00000641029 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
CASC19-207ENST00000641029 GPR153Q6NV75 609 aa12.81□□□□□ -0.36
CASC19-207ENST00000641029 PHF8Q9UPP1 1060 aa12.81□□□□□ -0.36
CASC19-207ENST00000641029 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
CASC19-207ENST00000641029 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
CASC19-207ENST00000641029 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
CASC19-207ENST00000641029 WIZO95785 1651 aa12.73□□□□□ -0.37
CASC19-207ENST00000641029 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
CASC19-207ENST00000641029 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.38
CASC19-207ENST00000641029 PEG3Q9GZU2 1588 aa12.7□□□□□ -0.38
CASC19-207ENST00000641029 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
CASC19-207ENST00000641029 NLRP6P59044 892 aa12.69□□□□□ -0.38
CASC19-207ENST00000641029 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
CASC19-207ENST00000641029 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
CASC19-207ENST00000641029 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
CASC19-207ENST00000641029 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
CASC19-207ENST00000641029 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
CASC19-207ENST00000641029 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
CASC19-207ENST00000641029 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
CASC19-207ENST00000641029 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■□□□□ 9.6
CASC19-207ENST00000641029 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
CASC19-207ENST00000641029 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
CASC19-207ENST00000641029 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
CASC19-207ENST00000641029 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
CASC19-207ENST00000641029 PTGER2P43116 358 aa12.6□□□□□ -0.39
CASC19-207ENST00000641029 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
CASC19-207ENST00000641029 KIF3CO14782 793 aa12.59□□□□□ -0.39
CASC19-207ENST00000641029 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
CASC19-207ENST00000641029 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
CASC19-207ENST00000641029 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
CASC19-207ENST00000641029 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC19-207ENST00000641029 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
CASC19-207ENST00000641029 STK25O00506 426 aa12.51□□□□□ -0.41
CASC19-207ENST00000641029 NUDT7P0C024 238 aa12.5□□□□□ -0.41
CASC19-207ENST00000641029 SLC34A2O95436 690 aa12.49□□□□□ -0.41
CASC19-207ENST00000641029 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
CASC19-207ENST00000641029 PBX2P40425 430 aa12.46□□□□□ -0.41
CASC19-207ENST00000641029 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
CASC19-207ENST00000641029 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
CASC19-207ENST00000641029 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
CASC19-207ENST00000641029 PKD2Q13563 968 aa12.44□□□□□ -0.42
CASC19-207ENST00000641029 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
CASC19-207ENST00000641029 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
CASC19-207ENST00000641029 RGL2O15211 777 aa12.39□□□□□ -0.43
CASC19-207ENST00000641029 PPP1R37O75864 691 aa12.38□□□□□ -0.43
CASC19-207ENST00000641029 NESP48681 1621 aa12.36□□□□□ -0.43
CASC19-207ENST00000641029 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
CASC19-207ENST00000641029 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
CASC19-207ENST00000641029 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
CASC19-207ENST00000641029 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
CASC19-207ENST00000641029 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
CASC19-207ENST00000641029 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
CASC19-207ENST00000641029 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
CASC19-207ENST00000641029 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
CASC19-207ENST00000641029 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
CASC19-207ENST00000641029 CFTRP13569 1480 aa12.27□□□□□ -0.45
CASC19-207ENST00000641029 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
CASC19-207ENST00000641029 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
CASC19-207ENST00000641029 FOXK1P85037 733 aa12.25□□□□□ -0.45
CASC19-207ENST00000641029 TK2O00142 265 aa12.24□□□□□ -0.45
CASC19-207ENST00000641029 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
CASC19-207ENST00000641029 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
CASC19-207ENST00000641029 EEA1Q15075 1411 aa12.23□□□□□ -0.45
CASC19-207ENST00000641029 HRO43593 1189 aa12.23□□□□□ -0.45
CASC19-207ENST00000641029 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
CASC19-207ENST00000641029 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
CASC19-207ENST00000641029 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
CASC19-207ENST00000641029 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
CASC19-207ENST00000641029 PSEN2P49810 448 aa12.21□□□□□ -0.45
CASC19-207ENST00000641029 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
CASC19-207ENST00000641029 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
CASC19-207ENST00000641029 DSG2Q14126 1118 aa12.17□□□□□ -0.46
CASC19-207ENST00000641029 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
CASC19-207ENST00000641029 THOC2Q8NI27 1593 aaKnown RBP12.17□□□□□ -0.46
CASC19-207ENST00000641029 TBC1D12O60347 775 aa12.16□□□□□ -0.46
CASC19-207ENST00000641029 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
CASC19-207ENST00000641029 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
CASC19-207ENST00000641029 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
CASC19-207ENST00000641029 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
CASC19-207ENST00000641029 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
CASC19-207ENST00000641029 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
CASC19-207ENST00000641029 SOGA1O94964 1423 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms