RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
KCNMA1-293ENST00000640969 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
KCNMA1-293ENST00000640969 KTN1Q86UP2 1357 aaKnown RBP25■■□□□ 1.59
KCNMA1-293ENST00000640969 GBP4Q96PP9 640 aa25■■□□□ 1.59
KCNMA1-293ENST00000640969 SAFB2Q14151 953 aaKnown RBP eCLIP25■■□□□ 1.59
KCNMA1-293ENST00000640969 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
KCNMA1-293ENST00000640969 PTMSP20962 102 aa24.98■■□□□ 1.59
KCNMA1-293ENST00000640969 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
KCNMA1-293ENST00000640969 IPO8O15397 1037 aaKnown RBP24.97■■□□□ 1.59
KCNMA1-293ENST00000640969 KIAA1211Q6ZU35 1233 aa24.97■■□□□ 1.59
KCNMA1-293ENST00000640969 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
KCNMA1-293ENST00000640969 GZF1Q9H116 711 aaPredicted RBP24.96■■□□□ 1.59
KCNMA1-293ENST00000640969 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.59
KCNMA1-293ENST00000640969 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
KCNMA1-293ENST00000640969 ITPRIPQ8IWB1 547 aa24.93■■□□□ 1.58
KCNMA1-293ENST00000640969 RCAN3Q9UKA8 241 aa24.93■■□□□ 1.58
KCNMA1-293ENST00000640969 SLKQ9H2G2 1235 aaPredicted RBP24.93■■□□□ 1.58
KCNMA1-293ENST00000640969 KIAA2012Q0VF49 1180 aa24.93■■□□□ 1.58
KCNMA1-293ENST00000640969 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
KCNMA1-293ENST00000640969 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
KCNMA1-293ENST00000640969 SETD5Q9C0A6 1442 aa24.91■■□□□ 1.58
KCNMA1-293ENST00000640969 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
KCNMA1-293ENST00000640969 NCBP3Q53F19 620 aaKnown RBP24.89■■□□□ 1.58
KCNMA1-293ENST00000640969 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
KCNMA1-293ENST00000640969 ARID3AQ99856 593 aa24.88■■□□□ 1.57
KCNMA1-293ENST00000640969 TCERG1O14776 1098 aaKnown RBP24.88■■□□□ 1.57
KCNMA1-293ENST00000640969 STK26Q9P289 416 aa24.86■■□□□ 1.57
KCNMA1-293ENST00000640969 MLECQ14165 292 aa24.86■■□□□ 1.57
KCNMA1-293ENST00000640969 U2AF1L5P0DN76 240 aaPredicted RBP24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 U2AF1Q01081 240 aaKnown RBP eCLIP24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 CALD1Q05682 793 aaKnown RBP24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 PKD2Q13563 968 aa24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 SYAP1Q96A49 352 aaPredicted RBP24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 HTATSF1O43719 755 aaKnown RBP24.84■■□□□ 1.57
KCNMA1-293ENST00000640969 MFAP1P55081 439 aaKnown RBP24.82■■□□□ 1.56
KCNMA1-293ENST00000640969 FOXD1Q16676 465 aa24.82■■□□□ 1.56
KCNMA1-293ENST00000640969 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
KCNMA1-293ENST00000640969 RALBP1Q15311 655 aa24.82■■□□□ 1.56
KCNMA1-293ENST00000640969 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
KCNMA1-293ENST00000640969 PMFBP1Q8TBY8 1022 aa24.8■■□□□ 1.56
KCNMA1-293ENST00000640969 GOLGA6L3A6NEY3 463 aa24.8■■□□□ 1.56
KCNMA1-293ENST00000640969 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
KCNMA1-293ENST00000640969 NOC3LQ8WTT2 800 aaKnown RBP24.78■■□□□ 1.56
KCNMA1-293ENST00000640969 TPM4P67936 248 aa24.77■■□□□ 1.56
KCNMA1-293ENST00000640969 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
KCNMA1-293ENST00000640969 HSP90B1P14625 803 aaKnown RBP24.75■■□□□ 1.55
KCNMA1-293ENST00000640969 ZNF330Q9Y3S2 320 aaPredicted RBP24.74■■□□□ 1.55
KCNMA1-293ENST00000640969 GGT6Q6P531 493 aa24.74■■□□□ 1.55
KCNMA1-293ENST00000640969 PAK3O75914 559 aaPredicted RBP24.73■■□□□ 1.55
KCNMA1-293ENST00000640969 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
KCNMA1-293ENST00000640969 IPO9Q96P70 1041 aaKnown RBP24.73■■□□□ 1.55
KCNMA1-293ENST00000640969 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
KCNMA1-293ENST00000640969 TRIM6-TRIM34B2RNG4 842 aa24.71■■□□□ 1.55
KCNMA1-293ENST00000640969 CUX2O14529 1486 aa24.71■■□□□ 1.55
KCNMA1-293ENST00000640969 GPATCH3Q96I76 525 aa24.7■■□□□ 1.54
KCNMA1-293ENST00000640969 STK31Q9BXU1 1019 aa24.7■■□□□ 1.54
KCNMA1-293ENST00000640969 FOXD4L1Q9NU39 408 aa24.69■■□□□ 1.54
KCNMA1-293ENST00000640969 CSB-PGBD3P0DP91 1061 aa24.68■■□□□ 1.54
KCNMA1-293ENST00000640969 TSHZ2Q9NRE2 1034 aa24.68■■□□□ 1.54
KCNMA1-293ENST00000640969 SOGA1O94964 1423 aa24.68■■□□□ 1.54
KCNMA1-293ENST00000640969 GORABQ5T7V8 394 aa24.68■■□□□ 1.54
KCNMA1-293ENST00000640969 NOL8Q76FK4 1167 aaKnown RBP24.67■■□□□ 1.54
KCNMA1-293ENST00000640969 SPAG9O60271 1321 aaKnown RBP24.67■■□□□ 1.54
KCNMA1-293ENST00000640969 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
KCNMA1-293ENST00000640969 CSPP1Q1MSJ5 1256 aa24.66■■□□□ 1.54
KCNMA1-293ENST00000640969 CHMP3Q9Y3E7 222 aa24.66■■□□□ 1.54
KCNMA1-293ENST00000640969 HMMRO75330 724 aa24.65■■□□□ 1.54
KCNMA1-293ENST00000640969 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
KCNMA1-293ENST00000640969 EIF3AQ14152 1382 aaKnown RBP24.64■■□□□ 1.54
KCNMA1-293ENST00000640969 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
KCNMA1-293ENST00000640969 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.54
KCNMA1-293ENST00000640969 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
KCNMA1-293ENST00000640969 TNNT3P45378 269 aaPredicted RBP24.63■■□□□ 1.53
KCNMA1-293ENST00000640969 CLUAP1Q96AJ1 413 aa24.63■■□□□ 1.53
KCNMA1-293ENST00000640969 CCDC34Q96HJ3 373 aa24.62■■□□□ 1.53
KCNMA1-293ENST00000640969 NUP155O75694 1391 aa24.61■■□□□ 1.53
KCNMA1-293ENST00000640969 CENPJQ9HC77 1338 aaPredicted RBP24.61■■□□□ 1.53
KCNMA1-293ENST00000640969 GOLGA6L1Q8N7Z2 621 aa24.61■■□□□ 1.53
KCNMA1-293ENST00000640969 SLC4A10Q6U841 1118 aa24.6■■□□□ 1.53
KCNMA1-293ENST00000640969 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
KCNMA1-293ENST00000640969 TAF7LQ5H9L4 462 aa24.59■■□□□ 1.53
KCNMA1-293ENST00000640969 RASSF8Q8NHQ8 419 aa24.57■■□□□ 1.52
KCNMA1-293ENST00000640969 A0A0U1RQG5 324 aaPredicted RBP24.57■■□□□ 1.52
KCNMA1-293ENST00000640969 CREBRFQ8IUR6 639 aa24.56■■□□□ 1.52
KCNMA1-293ENST00000640969 HDAC5Q9UQL6 1122 aa24.56■■□□□ 1.52
KCNMA1-293ENST00000640969 PHF14O94880 888 aa24.55■■□□□ 1.52
KCNMA1-293ENST00000640969 ST18O60284 1047 aa24.54■■□□□ 1.52
KCNMA1-293ENST00000640969 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
KCNMA1-293ENST00000640969 FOXD4L5Q5VV16 416 aaPredicted RBP24.54■■□□□ 1.52
KCNMA1-293ENST00000640969 FOXD4L4Q8WXT5 416 aaPredicted RBP24.54■■□□□ 1.52
KCNMA1-293ENST00000640969 PDE4CQ08493 712 aa24.54■■□□□ 1.52
KCNMA1-293ENST00000640969 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
KCNMA1-293ENST00000640969 NACADO15069 1562 aa24.53■■□□□ 1.52
KCNMA1-293ENST00000640969 TERF2IPQ9NYB0 399 aa24.53■■□□□ 1.52
KCNMA1-293ENST00000640969 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
KCNMA1-293ENST00000640969 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
KCNMA1-293ENST00000640969 KIF16BQ96L93 1317 aa24.52■■□□□ 1.52
KCNMA1-293ENST00000640969 NLRP13Q86W25 1043 aa24.51■■□□□ 1.51
KCNMA1-293ENST00000640969 TMX4Q9H1E5 349 aaPredicted RBP24.5■■□□□ 1.51
KCNMA1-293ENST00000640969 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms