RNA–Protein interactions for RNA: ENST00000640021.1

NOTCH2-208, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-208ENST00000640021 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
NOTCH2-208ENST00000640021 ABCC5O15440 1437 aa17.23■□□□□ 0.35
NOTCH2-208ENST00000640021 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
NOTCH2-208ENST00000640021 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
NOTCH2-208ENST00000640021 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
NOTCH2-208ENST00000640021 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
NOTCH2-208ENST00000640021 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
NOTCH2-208ENST00000640021 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
NOTCH2-208ENST00000640021 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
NOTCH2-208ENST00000640021 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
NOTCH2-208ENST00000640021 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
NOTCH2-208ENST00000640021 FOXD1Q16676 465 aa17.16■□□□□ 0.34
NOTCH2-208ENST00000640021 BCANQ96GW7 911 aa17.16■□□□□ 0.34
NOTCH2-208ENST00000640021 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
NOTCH2-208ENST00000640021 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
NOTCH2-208ENST00000640021 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
NOTCH2-208ENST00000640021 CNTLNQ9NXG0 1405 aa17.15■□□□□ 0.34
NOTCH2-208ENST00000640021 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
NOTCH2-208ENST00000640021 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.34
NOTCH2-208ENST00000640021 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
NOTCH2-208ENST00000640021 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
NOTCH2-208ENST00000640021 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
NOTCH2-208ENST00000640021 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
NOTCH2-208ENST00000640021 CEP170Q5SW79 1584 aa17.13■□□□□ 0.33
NOTCH2-208ENST00000640021 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
NOTCH2-208ENST00000640021 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
NOTCH2-208ENST00000640021 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
NOTCH2-208ENST00000640021 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
NOTCH2-208ENST00000640021 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
NOTCH2-208ENST00000640021 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
NOTCH2-208ENST00000640021 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
NOTCH2-208ENST00000640021 PLB1Q6P1J6 1458 aa17.09■□□□□ 0.33
NOTCH2-208ENST00000640021 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
NOTCH2-208ENST00000640021 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
NOTCH2-208ENST00000640021 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.33
NOTCH2-208ENST00000640021 PZPP20742 1482 aa17.07■□□□□ 0.32
NOTCH2-208ENST00000640021 KIF14Q15058 1648 aa17.07■□□□□ 0.32
NOTCH2-208ENST00000640021 ANKRD30AQ9BXX3 1397 aa17.06■□□□□ 0.32
NOTCH2-208ENST00000640021 FBLN2P98095 1184 aa17.06■□□□□ 0.32
NOTCH2-208ENST00000640021 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
NOTCH2-208ENST00000640021 NUP160Q12769 1436 aa17.05■□□□□ 0.32
NOTCH2-208ENST00000640021 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
NOTCH2-208ENST00000640021 SPATA31E1Q6ZUB1 1445 aa17.04■□□□□ 0.32
NOTCH2-208ENST00000640021 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
NOTCH2-208ENST00000640021 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
NOTCH2-208ENST00000640021 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
NOTCH2-208ENST00000640021 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
NOTCH2-208ENST00000640021 CDC42BPAQ5VT25 1732 aa17■□□□□ 0.31
NOTCH2-208ENST00000640021 KIF7Q2M1P5 1343 aa17■□□□□ 0.31
NOTCH2-208ENST00000640021 ABCA8O94911 1581 aa17■□□□□ 0.31
NOTCH2-208ENST00000640021 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
NOTCH2-208ENST00000640021 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
NOTCH2-208ENST00000640021 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
NOTCH2-208ENST00000640021 PKD2Q13563 968 aa16.98■□□□□ 0.31
NOTCH2-208ENST00000640021 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
NOTCH2-208ENST00000640021 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
NOTCH2-208ENST00000640021 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
NOTCH2-208ENST00000640021 ATP10BO94823 1461 aa16.95■□□□□ 0.3
NOTCH2-208ENST00000640021 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
NOTCH2-208ENST00000640021 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
NOTCH2-208ENST00000640021 CCDC184Q52MB2 194 aa16.95■□□□□ 0.3
NOTCH2-208ENST00000640021 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
NOTCH2-208ENST00000640021 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
NOTCH2-208ENST00000640021 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
NOTCH2-208ENST00000640021 ZBED9Q6R2W3 1325 aa16.93■□□□□ 0.3
NOTCH2-208ENST00000640021 USP47Q96K76 1375 aa16.93■□□□□ 0.3
NOTCH2-208ENST00000640021 NUP155O75694 1391 aa16.92■□□□□ 0.3
NOTCH2-208ENST00000640021 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
NOTCH2-208ENST00000640021 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
NOTCH2-208ENST00000640021 KDM5CP41229 1560 aa16.9■□□□□ 0.3
NOTCH2-208ENST00000640021 ARHGEF5Q12774 1597 aa16.9■□□□□ 0.3
NOTCH2-208ENST00000640021 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
NOTCH2-208ENST00000640021 RBM19Q9Y4C8 960 aaKnown RBP16.9■□□□□ 0.3
NOTCH2-208ENST00000640021 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
NOTCH2-208ENST00000640021 BCORL1Q5H9F3 1711 aa16.88■□□□□ 0.29
NOTCH2-208ENST00000640021 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
NOTCH2-208ENST00000640021 RALGAPBQ86X10 1494 aa16.87■□□□□ 0.29
NOTCH2-208ENST00000640021 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
NOTCH2-208ENST00000640021 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
NOTCH2-208ENST00000640021 PTPRGP23470 1445 aa16.86■□□□□ 0.29
NOTCH2-208ENST00000640021 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
NOTCH2-208ENST00000640021 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
NOTCH2-208ENST00000640021 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
NOTCH2-208ENST00000640021 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
NOTCH2-208ENST00000640021 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
NOTCH2-208ENST00000640021 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
NOTCH2-208ENST00000640021 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
NOTCH2-208ENST00000640021 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
NOTCH2-208ENST00000640021 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
NOTCH2-208ENST00000640021 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
NOTCH2-208ENST00000640021 SAMD9LQ8IVG5 1584 aa16.8■□□□□ 0.28
NOTCH2-208ENST00000640021 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
NOTCH2-208ENST00000640021 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.28
NOTCH2-208ENST00000640021 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.27
NOTCH2-208ENST00000640021 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
NOTCH2-208ENST00000640021 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
NOTCH2-208ENST00000640021 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
NOTCH2-208ENST00000640021 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
NOTCH2-208ENST00000640021 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
NOTCH2-208ENST00000640021 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms