RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 NAP1L2Q9ULW6 460 aaPredicted RBP13.83□□□□□ -0.2
SMARCA2-266ENST00000639760 KDM5BQ9UGL1 1544 aa13.83□□□□□ -0.2
SMARCA2-266ENST00000639760 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
SMARCA2-266ENST00000639760 PANK2Q9BZ23 570 aa13.82□□□□□ -0.2
SMARCA2-266ENST00000639760 ARXQ96QS3 562 aa13.82□□□□□ -0.2
SMARCA2-266ENST00000639760 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
SMARCA2-266ENST00000639760 CCDC7Q96M83 1385 aa13.81□□□□□ -0.2
SMARCA2-266ENST00000639760 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCA2-266ENST00000639760 NCOA1Q15788 1441 aa13.8□□□□□ -0.2
SMARCA2-266ENST00000639760 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
SMARCA2-266ENST00000639760 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
SMARCA2-266ENST00000639760 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
SMARCA2-266ENST00000639760 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
SMARCA2-266ENST00000639760 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
SMARCA2-266ENST00000639760 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
SMARCA2-266ENST00000639760 KIAA1211Q6ZU35 1233 aa13.77□□□□□ -0.21
SMARCA2-266ENST00000639760 NCLP19338 710 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-266ENST00000639760 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-266ENST00000639760 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
SMARCA2-266ENST00000639760 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-266ENST00000639760 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SMARCA2-266ENST00000639760 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
SMARCA2-266ENST00000639760 MRE11P49959 708 aa13.75□□□□□ -0.21
SMARCA2-266ENST00000639760 ZHX1Q9UKY1 873 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-266ENST00000639760 IPO4Q8TEX9 1081 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-266ENST00000639760 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
SMARCA2-266ENST00000639760 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-266ENST00000639760 KTN1Q86UP2 1357 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-266ENST00000639760 TIAM1Q13009 1591 aa13.73□□□□□ -0.21
SMARCA2-266ENST00000639760 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-266ENST00000639760 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-266ENST00000639760 PHLDB1Q86UU1 1377 aa13.72□□□□□ -0.21
SMARCA2-266ENST00000639760 TRIM44Q96DX7 344 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-266ENST00000639760 RIPK4P57078 832 aa13.71□□□□□ -0.21
SMARCA2-266ENST00000639760 TERF1P54274 439 aa13.7□□□□□ -0.22
SMARCA2-266ENST00000639760 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
SMARCA2-266ENST00000639760 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-266ENST00000639760 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
SMARCA2-266ENST00000639760 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
SMARCA2-266ENST00000639760 DMTNQ08495 405 aa13.69□□□□□ -0.22
SMARCA2-266ENST00000639760 BECN1Q14457 450 aa13.69□□□□□ -0.22
SMARCA2-266ENST00000639760 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
SMARCA2-266ENST00000639760 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 GRPEL1Q9HAV7 217 aa13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 KDM2BQ8NHM5 1336 aa13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 LRRC9Q6ZRR7 1453 aa13.68□□□□□ -0.22
SMARCA2-266ENST00000639760 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
SMARCA2-266ENST00000639760 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
SMARCA2-266ENST00000639760 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-266ENST00000639760 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-266ENST00000639760 OFD1O75665 1012 aa13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 CRBNQ96SW2 442 aa13.66□□□□□ -0.22
SMARCA2-266ENST00000639760 ANTXR1Q9H6X2 564 aa13.65□□□□□ -0.22
SMARCA2-266ENST00000639760 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
SMARCA2-266ENST00000639760 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
SMARCA2-266ENST00000639760 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
SMARCA2-266ENST00000639760 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
SMARCA2-266ENST00000639760 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
SMARCA2-266ENST00000639760 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
SMARCA2-266ENST00000639760 MCM4P33991 863 aa13.63□□□□□ -0.23
SMARCA2-266ENST00000639760 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
SMARCA2-266ENST00000639760 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
SMARCA2-266ENST00000639760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCA2-266ENST00000639760 PDE3BQ13370 1112 aa13.61□□□□□ -0.23
SMARCA2-266ENST00000639760 TMEM51Q9NW97 253 aa13.61□□□□□ -0.23
SMARCA2-266ENST00000639760 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
SMARCA2-266ENST00000639760 USP19O94966 1318 aa13.61□□□□□ -0.23
SMARCA2-266ENST00000639760 PLIN1O60240 522 aa13.6□□□□□ -0.23
SMARCA2-266ENST00000639760 TRAK2O60296 914 aa13.6□□□□□ -0.23
SMARCA2-266ENST00000639760 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
SMARCA2-266ENST00000639760 ZSCAN20P17040 1043 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-266ENST00000639760 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
SMARCA2-266ENST00000639760 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
SMARCA2-266ENST00000639760 KIF20AO95235 890 aa13.58□□□□□ -0.23
SMARCA2-266ENST00000639760 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
SMARCA2-266ENST00000639760 HFM1A2PYH4 1435 aa13.58□□□□□ -0.24
SMARCA2-266ENST00000639760 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
SMARCA2-266ENST00000639760 ARID3AQ99856 593 aa13.57□□□□□ -0.24
SMARCA2-266ENST00000639760 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-266ENST00000639760 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 UQCRHP07919 91 aa13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 MSNP26038 577 aaKnown RBP13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 GTPBP4Q9BZE4 634 aaKnown RBP13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 CFAP43Q8NDM7 1665 aa13.56□□□□□ -0.24
SMARCA2-266ENST00000639760 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
SMARCA2-266ENST00000639760 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
SMARCA2-266ENST00000639760 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
SMARCA2-266ENST00000639760 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMARCA2-266ENST00000639760 CCDC173Q0VFZ6 552 aa13.54□□□□□ -0.24
SMARCA2-266ENST00000639760 LETM1O95202 739 aaPredicted RBP13.53□□□□□ -0.24
SMARCA2-266ENST00000639760 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.24
SMARCA2-266ENST00000639760 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms