RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
NECAP1-217ENST00000639276 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
NECAP1-217ENST00000639276 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.35
NECAP1-217ENST00000639276 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.35
NECAP1-217ENST00000639276 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-217ENST00000639276 GCC2Q8IWJ2 1684 aa12.88□□□□□ -0.35
NECAP1-217ENST00000639276 CAMSAP2Q08AD1 1489 aa12.88□□□□□ -0.35
NECAP1-217ENST00000639276 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
NECAP1-217ENST00000639276 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
NECAP1-217ENST00000639276 AKNAQ7Z591 1439 aa12.86□□□□□ -0.35
NECAP1-217ENST00000639276 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
NECAP1-217ENST00000639276 ADCY10Q96PN6 1610 aa12.86□□□□□ -0.35
NECAP1-217ENST00000639276 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
NECAP1-217ENST00000639276 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
NECAP1-217ENST00000639276 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
NECAP1-217ENST00000639276 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
NECAP1-217ENST00000639276 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
NECAP1-217ENST00000639276 CDC42BPAQ5VT25 1732 aa12.83□□□□□ -0.36
NECAP1-217ENST00000639276 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
NECAP1-217ENST00000639276 ACIN1Q9UKV3 1341 aaKnown RBP12.83□□□□□ -0.36
NECAP1-217ENST00000639276 HNRNPMP52272 730 aaKnown RBP eCLIP12.82□□□□□ -0.36
NECAP1-217ENST00000639276 NCOA1Q15788 1441 aa12.81□□□□□ -0.36
NECAP1-217ENST00000639276 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
NECAP1-217ENST00000639276 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
NECAP1-217ENST00000639276 DDX10Q13206 875 aaKnown RBP12.78□□□□□ -0.36
NECAP1-217ENST00000639276 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
NECAP1-217ENST00000639276 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.36
NECAP1-217ENST00000639276 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
NECAP1-217ENST00000639276 CROCC2H7BZ55 1655 aa12.76□□□□□ -0.37
NECAP1-217ENST00000639276 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
NECAP1-217ENST00000639276 ANKRD30AQ9BXX3 1397 aa12.75□□□□□ -0.37
NECAP1-217ENST00000639276 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
NECAP1-217ENST00000639276 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
NECAP1-217ENST00000639276 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 ADGRL2O95490 1459 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 ADGBQ8N7X0 1667 aa12.74□□□□□ -0.37
NECAP1-217ENST00000639276 PZPP20742 1482 aa12.73□□□□□ -0.37
NECAP1-217ENST00000639276 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
NECAP1-217ENST00000639276 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
NECAP1-217ENST00000639276 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
NECAP1-217ENST00000639276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
NECAP1-217ENST00000639276 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
NECAP1-217ENST00000639276 PKD2Q13563 968 aa12.71□□□□□ -0.38
NECAP1-217ENST00000639276 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
NECAP1-217ENST00000639276 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
NECAP1-217ENST00000639276 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
NECAP1-217ENST00000639276 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
NECAP1-217ENST00000639276 RPRD2Q5VT52 1461 aaKnown RBP12.68□□□□□ -0.38
NECAP1-217ENST00000639276 NUP155O75694 1391 aa12.68□□□□□ -0.38
NECAP1-217ENST00000639276 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
NECAP1-217ENST00000639276 KIF15Q9NS87 1388 aa12.68□□□□□ -0.38
NECAP1-217ENST00000639276 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
NECAP1-217ENST00000639276 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
NECAP1-217ENST00000639276 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
NECAP1-217ENST00000639276 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
NECAP1-217ENST00000639276 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
NECAP1-217ENST00000639276 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
NECAP1-217ENST00000639276 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.39
NECAP1-217ENST00000639276 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
NECAP1-217ENST00000639276 ARHGEF12Q9NZN5 1544 aa12.64□□□□□ -0.39
NECAP1-217ENST00000639276 MYO5CQ9NQX4 1742 aa12.63□□□□□ -0.39
NECAP1-217ENST00000639276 ZNF326Q5BKZ1 582 aaKnown RBP12.62□□□□□ -0.39
NECAP1-217ENST00000639276 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
NECAP1-217ENST00000639276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
NECAP1-217ENST00000639276 PLCH2O75038 1416 aa12.62□□□□□ -0.39
NECAP1-217ENST00000639276 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
NECAP1-217ENST00000639276 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
NECAP1-217ENST00000639276 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
NECAP1-217ENST00000639276 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
NECAP1-217ENST00000639276 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
NECAP1-217ENST00000639276 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
NECAP1-217ENST00000639276 TRAPPC8Q9Y2L5 1435 aa12.59□□□□□ -0.39
NECAP1-217ENST00000639276 PLEKHH2Q8IVE3 1493 aa12.57□□□□□ -0.4
NECAP1-217ENST00000639276 ANP32CO43423 234 aa12.56□□□□□ -0.4
NECAP1-217ENST00000639276 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
NECAP1-217ENST00000639276 KDM5DQ9BY66 1539 aa12.56□□□□□ -0.4
NECAP1-217ENST00000639276 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
NECAP1-217ENST00000639276 WDR7Q9Y4E6 1490 aa12.55□□□□□ -0.4
NECAP1-217ENST00000639276 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
NECAP1-217ENST00000639276 ABCC1P33527 1531 aa12.54□□□□□ -0.4
NECAP1-217ENST00000639276 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
NECAP1-217ENST00000639276 ASXL2Q76L83 1435 aa12.52□□□□□ -0.4
NECAP1-217ENST00000639276 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
NECAP1-217ENST00000639276 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
NECAP1-217ENST00000639276 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
NECAP1-217ENST00000639276 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
NECAP1-217ENST00000639276 PLA2R1Q13018 1463 aa12.5□□□□□ -0.41
NECAP1-217ENST00000639276 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
NECAP1-217ENST00000639276 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
NECAP1-217ENST00000639276 FANCAO15360 1455 aa12.49□□□□□ -0.41
NECAP1-217ENST00000639276 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
NECAP1-217ENST00000639276 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
NECAP1-217ENST00000639276 UNC13BO14795 1591 aa12.49□□□□□ -0.41
NECAP1-217ENST00000639276 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
NECAP1-217ENST00000639276 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
NECAP1-217ENST00000639276 USP47Q96K76 1375 aa12.48□□□□□ -0.41
NECAP1-217ENST00000639276 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms