RNA–Protein interactions for RNA: ENST00000639113.1

PRICKLE2-207, Transcript of prickle planar cell polarity protein 2, humanhuman

TSL 2

Gene PRICKLE2, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-207ENST00000639113 ARHGEF12Q9NZN5 1544 aa12.17□□□□□ -0.46
PRICKLE2-207ENST00000639113 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
PRICKLE2-207ENST00000639113 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
PRICKLE2-207ENST00000639113 NCOA1Q15788 1441 aa12.17□□□□□ -0.46
PRICKLE2-207ENST00000639113 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
PRICKLE2-207ENST00000639113 TOM1O60784 492 aa12.15□□□□□ -0.46
PRICKLE2-207ENST00000639113 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
PRICKLE2-207ENST00000639113 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
PRICKLE2-207ENST00000639113 RGS17Q9UGC6 210 aaPredicted RBP12.14□□□□□ -0.47
PRICKLE2-207ENST00000639113 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
PRICKLE2-207ENST00000639113 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
PRICKLE2-207ENST00000639113 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
PRICKLE2-207ENST00000639113 RAPGEF2Q9Y4G8 1499 aa12.13□□□□□ -0.47
PRICKLE2-207ENST00000639113 ZMYM4Q5VZL5 1548 aa12.12□□□□□ -0.47
PRICKLE2-207ENST00000639113 ATP10AO60312 1499 aa12.11□□□□□ -0.47
PRICKLE2-207ENST00000639113 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
PRICKLE2-207ENST00000639113 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
PRICKLE2-207ENST00000639113 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
PRICKLE2-207ENST00000639113 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
PRICKLE2-207ENST00000639113 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
PRICKLE2-207ENST00000639113 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
PRICKLE2-207ENST00000639113 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
PRICKLE2-207ENST00000639113 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
PRICKLE2-207ENST00000639113 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
PRICKLE2-207ENST00000639113 PPP6R1Q9UPN7 881 aa12.05□□□□□ -0.48
PRICKLE2-207ENST00000639113 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
PRICKLE2-207ENST00000639113 PKD2Q13563 968 aa12.04□□□□□ -0.48
PRICKLE2-207ENST00000639113 CFAP74Q9C0B2 1584 aa12□□□□□ -0.49
PRICKLE2-207ENST00000639113 C3P01024 1663 aa12□□□□□ -0.49
PRICKLE2-207ENST00000639113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRICKLE2-207ENST00000639113 AFAP1Q8N556 730 aa11.97□□□□□ -0.49
PRICKLE2-207ENST00000639113 PTPRKQ15262 1439 aa11.96□□□□□ -0.49
PRICKLE2-207ENST00000639113 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
PRICKLE2-207ENST00000639113 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRICKLE2-207ENST00000639113 NUP153P49790 1475 aaKnown RBP11.94□□□□□ -0.5
PRICKLE2-207ENST00000639113 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
PRICKLE2-207ENST00000639113 CPS1P31327 1500 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 EFCAB2Q5VUJ9 269 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 NPATQ14207 1427 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 RAPGEF6Q8TEU7 1601 aa11.93□□□□□ -0.5
PRICKLE2-207ENST00000639113 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
PRICKLE2-207ENST00000639113 PLCH2O75038 1416 aa11.92□□□□□ -0.5
PRICKLE2-207ENST00000639113 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
PRICKLE2-207ENST00000639113 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
PRICKLE2-207ENST00000639113 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
PRICKLE2-207ENST00000639113 AGLP35573 1532 aa11.88□□□□□ -0.51
PRICKLE2-207ENST00000639113 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
PRICKLE2-207ENST00000639113 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
PRICKLE2-207ENST00000639113 DIP2CQ9Y2E4 1556 aa11.87□□□□□ -0.51
PRICKLE2-207ENST00000639113 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
PRICKLE2-207ENST00000639113 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
PRICKLE2-207ENST00000639113 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
PRICKLE2-207ENST00000639113 KDM5CP41229 1560 aa11.82□□□□□ -0.52
PRICKLE2-207ENST00000639113 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
PRICKLE2-207ENST00000639113 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
PRICKLE2-207ENST00000639113 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
PRICKLE2-207ENST00000639113 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
PRICKLE2-207ENST00000639113 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
PRICKLE2-207ENST00000639113 MLH3Q9UHC1 1453 aa11.8□□□□□ -0.52
PRICKLE2-207ENST00000639113 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
PRICKLE2-207ENST00000639113 SUPT6HQ7KZ85 1726 aaKnown RBP11.79□□□□□ -0.52
PRICKLE2-207ENST00000639113 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
PRICKLE2-207ENST00000639113 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
PRICKLE2-207ENST00000639113 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
PRICKLE2-207ENST00000639113 LRRC7Q96NW7 1537 aa11.77□□□□□ -0.52
PRICKLE2-207ENST00000639113 SAMD9Q5K651 1589 aa11.77□□□□□ -0.53
PRICKLE2-207ENST00000639113 NEURL4Q96JN8 1562 aa11.77□□□□□ -0.53
PRICKLE2-207ENST00000639113 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
PRICKLE2-207ENST00000639113 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
PRICKLE2-207ENST00000639113 GGT6Q6P531 493 aa11.76□□□□□ -0.53
PRICKLE2-207ENST00000639113 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
PRICKLE2-207ENST00000639113 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
PRICKLE2-207ENST00000639113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRICKLE2-207ENST00000639113 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
PRICKLE2-207ENST00000639113 NPHP4O75161 1426 aaPredicted RBP11.74□□□□□ -0.53
PRICKLE2-207ENST00000639113 RNF17Q9BXT8 1623 aaKnown RBP11.72□□□□□ -0.53
PRICKLE2-207ENST00000639113 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
PRICKLE2-207ENST00000639113 FBXO31Q5XUX0 539 aaPredicted RBP11.71□□□□□ -0.53
PRICKLE2-207ENST00000639113 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
PRICKLE2-207ENST00000639113 MYO5CQ9NQX4 1742 aa11.71□□□□□ -0.54
PRICKLE2-207ENST00000639113 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
PRICKLE2-207ENST00000639113 RXRBP28702 533 aa11.69□□□□□ -0.54
PRICKLE2-207ENST00000639113 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
PRICKLE2-207ENST00000639113 POLR1AO95602 1720 aaPredicted RBP11.69□□□□□ -0.54
PRICKLE2-207ENST00000639113 TNRQ92752 1358 aa11.68□□□□□ -0.54
PRICKLE2-207ENST00000639113 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
PRICKLE2-207ENST00000639113 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
PRICKLE2-207ENST00000639113 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
PRICKLE2-207ENST00000639113 MED14O60244 1454 aa11.67□□□□□ -0.54
PRICKLE2-207ENST00000639113 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
PRICKLE2-207ENST00000639113 ABCC1P33527 1531 aa11.66□□□□□ -0.54
PRICKLE2-207ENST00000639113 KIF14Q15058 1648 aa11.66□□□□□ -0.54
PRICKLE2-207ENST00000639113 STRCP1A6NGW2 1772 aa11.66□□□□□ -0.54
PRICKLE2-207ENST00000639113 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
PRICKLE2-207ENST00000639113 JCADQ9P266 1359 aa11.64□□□□□ -0.55
PRICKLE2-207ENST00000639113 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
PRICKLE2-207ENST00000639113 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
PRICKLE2-207ENST00000639113 SYNMO15061 1565 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms