RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 ROCK1Q13464 1354 aa24.2■■□□□ 1.46
HCG27-205ENST00000638546 DNMT1P26358 1616 aaKnown RBP24.18■■□□□ 1.46
HCG27-205ENST00000638546 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
HCG27-205ENST00000638546 UHRF1BP1LA0JNW5 1464 aa24.15■■□□□ 1.46
HCG27-205ENST00000638546 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
HCG27-205ENST00000638546 GCC2Q8IWJ2 1684 aa24.15■■□□□ 1.46
HCG27-205ENST00000638546 ACIN1Q9UKV3 1341 aaKnown RBP24.15■■□□□ 1.46
HCG27-205ENST00000638546 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
HCG27-205ENST00000638546 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
HCG27-205ENST00000638546 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
HCG27-205ENST00000638546 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
HCG27-205ENST00000638546 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
HCG27-205ENST00000638546 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
HCG27-205ENST00000638546 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
HCG27-205ENST00000638546 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
HCG27-205ENST00000638546 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
HCG27-205ENST00000638546 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
HCG27-205ENST00000638546 KDM6BO15054 1643 aa24.03■■□□□ 1.44
HCG27-205ENST00000638546 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
HCG27-205ENST00000638546 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
HCG27-205ENST00000638546 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
HCG27-205ENST00000638546 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
HCG27-205ENST00000638546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
HCG27-205ENST00000638546 SHANK2Q9UPX8 1470 aa23.98■■□□□ 1.43
HCG27-205ENST00000638546 PREX2Q70Z35 1606 aa23.97■■□□□ 1.43
HCG27-205ENST00000638546 MPHOSPH9Q99550 1183 aa23.97■■□□□ 1.43
HCG27-205ENST00000638546 CROCC2H7BZ55 1655 aa23.97■■□□□ 1.43
HCG27-205ENST00000638546 TSPY4P0CV99 314 aa23.96■■□□□ 1.43
HCG27-205ENST00000638546 TSPY10P0CW01 314 aa23.96■■□□□ 1.43
HCG27-205ENST00000638546 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
HCG27-205ENST00000638546 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
HCG27-205ENST00000638546 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
HCG27-205ENST00000638546 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.42
HCG27-205ENST00000638546 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.42
HCG27-205ENST00000638546 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
HCG27-205ENST00000638546 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
HCG27-205ENST00000638546 MBD5Q9P267 1494 aa23.93■■□□□ 1.42
HCG27-205ENST00000638546 CDC42BPBQ9Y5S2 1711 aa23.92■■□□□ 1.42
HCG27-205ENST00000638546 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
HCG27-205ENST00000638546 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
HCG27-205ENST00000638546 PPP1R15AO75807 674 aaPredicted RBP23.91■■□□□ 1.42
HCG27-205ENST00000638546 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
HCG27-205ENST00000638546 ARHGAP5Q13017 1502 aa23.9■■□□□ 1.42
HCG27-205ENST00000638546 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
HCG27-205ENST00000638546 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
HCG27-205ENST00000638546 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
HCG27-205ENST00000638546 PLCH2O75038 1416 aa23.88■■□□□ 1.41
HCG27-205ENST00000638546 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
HCG27-205ENST00000638546 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
HCG27-205ENST00000638546 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
HCG27-205ENST00000638546 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
HCG27-205ENST00000638546 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
HCG27-205ENST00000638546 WDR7Q9Y4E6 1490 aa23.82■■□□□ 1.4
HCG27-205ENST00000638546 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
HCG27-205ENST00000638546 SYCP2Q9BX26 1530 aa23.8■■□□□ 1.4
HCG27-205ENST00000638546 PZPP20742 1482 aa23.79■■□□□ 1.4
HCG27-205ENST00000638546 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
HCG27-205ENST00000638546 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
HCG27-205ENST00000638546 FOXD1Q16676 465 aa23.77■■□□□ 1.4
HCG27-205ENST00000638546 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
HCG27-205ENST00000638546 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
HCG27-205ENST00000638546 ASXL2Q76L83 1435 aa23.73■■□□□ 1.39
HCG27-205ENST00000638546 ARHGEF12Q9NZN5 1544 aa23.72■■□□□ 1.39
HCG27-205ENST00000638546 NUP155O75694 1391 aa23.7■■□□□ 1.39
HCG27-205ENST00000638546 ABCC1P33527 1531 aa23.69■■□□□ 1.38
HCG27-205ENST00000638546 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
HCG27-205ENST00000638546 PKD2Q13563 968 aa23.68■■□□□ 1.38
HCG27-205ENST00000638546 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
HCG27-205ENST00000638546 ABCA9Q8IUA7 1624 aa23.66■■□□□ 1.38
HCG27-205ENST00000638546 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
HCG27-205ENST00000638546 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.38
HCG27-205ENST00000638546 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.38
HCG27-205ENST00000638546 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.37
HCG27-205ENST00000638546 MIER1Q8N108 512 aa23.63■■□□□ 1.37
HCG27-205ENST00000638546 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
HCG27-205ENST00000638546 FANCAO15360 1455 aa23.6■■□□□ 1.37
HCG27-205ENST00000638546 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
HCG27-205ENST00000638546 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
HCG27-205ENST00000638546 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
HCG27-205ENST00000638546 AFAP1Q8N556 730 aa23.55■■□□□ 1.36
HCG27-205ENST00000638546 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
HCG27-205ENST00000638546 UNC13BO14795 1591 aa23.53■■□□□ 1.36
HCG27-205ENST00000638546 FAM135AQ9P2D6 1515 aa23.53■■□□□ 1.36
HCG27-205ENST00000638546 SCAPERQ9BY12 1400 aa23.52■■□□□ 1.36
HCG27-205ENST00000638546 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
HCG27-205ENST00000638546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.49■■□□□ 1.35
HCG27-205ENST00000638546 CD109Q6YHK3 1445 aa23.49■■□□□ 1.35
HCG27-205ENST00000638546 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
HCG27-205ENST00000638546 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
HCG27-205ENST00000638546 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
HCG27-205ENST00000638546 MAGI2Q86UL8 1455 aa23.45■■□□□ 1.35
HCG27-205ENST00000638546 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
HCG27-205ENST00000638546 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
HCG27-205ENST00000638546 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
HCG27-205ENST00000638546 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
HCG27-205ENST00000638546 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
HCG27-205ENST00000638546 INO80Q9ULG1 1556 aaPredicted RBP23.42■■□□□ 1.34
HCG27-205ENST00000638546 CFAP74Q9C0B2 1584 aa23.41■■□□□ 1.34
HCG27-205ENST00000638546 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
HCG27-205ENST00000638546 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms