RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ROCK2O75116 1388 aaKnown RBP18.68■□□□□ 0.58
SCARB2-208ENST00000638372 KIF3BO15066 747 aa18.68■□□□□ 0.58
SCARB2-208ENST00000638372 SOX12O15370 315 aa18.68■□□□□ 0.58
SCARB2-208ENST00000638372 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
SCARB2-208ENST00000638372 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
SCARB2-208ENST00000638372 BECN1Q14457 450 aa18.64■□□□□ 0.57
SCARB2-208ENST00000638372 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
SCARB2-208ENST00000638372 KTN1Q86UP2 1357 aaKnown RBP18.62■□□□□ 0.57
SCARB2-208ENST00000638372 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
SCARB2-208ENST00000638372 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
SCARB2-208ENST00000638372 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
SCARB2-208ENST00000638372 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
SCARB2-208ENST00000638372 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
SCARB2-208ENST00000638372 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-208ENST00000638372 NUTM2DQ5VT03 806 aaPredicted RBP18.57■□□□□ 0.56
SCARB2-208ENST00000638372 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
SCARB2-208ENST00000638372 RALBP1Q15311 655 aa18.55■□□□□ 0.56
SCARB2-208ENST00000638372 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
SCARB2-208ENST00000638372 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
SCARB2-208ENST00000638372 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
SCARB2-208ENST00000638372 U2AF1L5P0DN76 240 aaPredicted RBP18.53■□□□□ 0.56
SCARB2-208ENST00000638372 U2AF1Q01081 240 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCARB2-208ENST00000638372 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
SCARB2-208ENST00000638372 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
SCARB2-208ENST00000638372 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
SCARB2-208ENST00000638372 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
SCARB2-208ENST00000638372 PHLDB1Q86UU1 1377 aa18.49■□□□□ 0.55
SCARB2-208ENST00000638372 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
SCARB2-208ENST00000638372 PTPRGP23470 1445 aa18.49■□□□□ 0.55
SCARB2-208ENST00000638372 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
SCARB2-208ENST00000638372 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
SCARB2-208ENST00000638372 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
SCARB2-208ENST00000638372 KIF21BO75037 1637 aa18.47■□□□□ 0.55
SCARB2-208ENST00000638372 MS4A1P11836 297 aa18.47■□□□□ 0.55
SCARB2-208ENST00000638372 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-208ENST00000638372 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
SCARB2-208ENST00000638372 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-208ENST00000638372 CCDC146Q8IYE0 955 aa18.45■□□□□ 0.54
SCARB2-208ENST00000638372 NCLP19338 710 aaKnown RBP18.44■□□□□ 0.54
SCARB2-208ENST00000638372 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.54
SCARB2-208ENST00000638372 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
SCARB2-208ENST00000638372 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
SCARB2-208ENST00000638372 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
SCARB2-208ENST00000638372 PANK3Q9H999 370 aa18.42■□□□□ 0.54
SCARB2-208ENST00000638372 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
SCARB2-208ENST00000638372 CASC1Q6TDU7 716 aa18.41■□□□□ 0.54
SCARB2-208ENST00000638372 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
SCARB2-208ENST00000638372 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
SCARB2-208ENST00000638372 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
SCARB2-208ENST00000638372 ERICH6BQ5W0A0 696 aa18.39■□□□□ 0.53
SCARB2-208ENST00000638372 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
SCARB2-208ENST00000638372 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
SCARB2-208ENST00000638372 USP47Q96K76 1375 aa18.37■□□□□ 0.53
SCARB2-208ENST00000638372 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
SCARB2-208ENST00000638372 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
SCARB2-208ENST00000638372 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
SCARB2-208ENST00000638372 APBB1O00213 710 aa18.37■□□□□ 0.53
SCARB2-208ENST00000638372 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
SCARB2-208ENST00000638372 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
SCARB2-208ENST00000638372 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
SCARB2-208ENST00000638372 MYOM3Q5VTT5 1437 aa18.36■□□□□ 0.53
SCARB2-208ENST00000638372 RTF1Q92541 710 aaKnown RBP18.35■□□□□ 0.53
SCARB2-208ENST00000638372 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
SCARB2-208ENST00000638372 TERF2IPQ9NYB0 399 aa18.33■□□□□ 0.53
SCARB2-208ENST00000638372 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-208ENST00000638372 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.52
SCARB2-208ENST00000638372 KIF15Q9NS87 1388 aa18.33■□□□□ 0.52
SCARB2-208ENST00000638372 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SCARB2-208ENST00000638372 CFTRP13569 1480 aa18.32■□□□□ 0.52
SCARB2-208ENST00000638372 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
SCARB2-208ENST00000638372 HSP90AB1P08238 724 aaKnown RBP18.32■□□□□ 0.52
SCARB2-208ENST00000638372 ITPRIPQ8IWB1 547 aa18.32■□□□□ 0.52
SCARB2-208ENST00000638372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCARB2-208ENST00000638372 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
SCARB2-208ENST00000638372 NESP48681 1621 aa18.31■□□□□ 0.52
SCARB2-208ENST00000638372 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
SCARB2-208ENST00000638372 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
SCARB2-208ENST00000638372 UACAQ9BZF9 1416 aa18.28■□□□□ 0.52
SCARB2-208ENST00000638372 PLIN1O60240 522 aa18.28■□□□□ 0.52
SCARB2-208ENST00000638372 TAOK2Q9UL54 1235 aa18.27■□□□□ 0.52
SCARB2-208ENST00000638372 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.51
SCARB2-208ENST00000638372 CASKIN1Q8WXD9 1431 aa18.27■□□□□ 0.51
SCARB2-208ENST00000638372 NCOA2Q15596 1464 aa18.27■□□□□ 0.51
SCARB2-208ENST00000638372 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
SCARB2-208ENST00000638372 KCNJ4P48050 445 aa18.26■□□□□ 0.51
SCARB2-208ENST00000638372 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
SCARB2-208ENST00000638372 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
SCARB2-208ENST00000638372 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
SCARB2-208ENST00000638372 RWDD1Q9H446 243 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-208ENST00000638372 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
SCARB2-208ENST00000638372 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
SCARB2-208ENST00000638372 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
SCARB2-208ENST00000638372 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
SCARB2-208ENST00000638372 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
SCARB2-208ENST00000638372 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-208ENST00000638372 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
SCARB2-208ENST00000638372 FGD1P98174 961 aa18.21■□□□□ 0.51
SCARB2-208ENST00000638372 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
SCARB2-208ENST00000638372 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-208ENST00000638372 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms