RNA–Protein interactions for RNA: ENST00000638203.1

KCNMA1-227, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-227ENST00000638203 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
KCNMA1-227ENST00000638203 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
KCNMA1-227ENST00000638203 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
KCNMA1-227ENST00000638203 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
KCNMA1-227ENST00000638203 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
KCNMA1-227ENST00000638203 EPRSP07814 1512 aaKnown RBP17.73■□□□□ 0.43
KCNMA1-227ENST00000638203 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
KCNMA1-227ENST00000638203 CCER2I3L3R5 266 aa17.71■□□□□ 0.43
KCNMA1-227ENST00000638203 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 WDR62O43379 1518 aa17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
KCNMA1-227ENST00000638203 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-227ENST00000638203 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
KCNMA1-227ENST00000638203 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
KCNMA1-227ENST00000638203 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-227ENST00000638203 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
KCNMA1-227ENST00000638203 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
KCNMA1-227ENST00000638203 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
KCNMA1-227ENST00000638203 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
KCNMA1-227ENST00000638203 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
KCNMA1-227ENST00000638203 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
KCNMA1-227ENST00000638203 ROCK1Q13464 1354 aa17.58■□□□□ 0.41
KCNMA1-227ENST00000638203 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
KCNMA1-227ENST00000638203 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-227ENST00000638203 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-227ENST00000638203 KDM5BQ9UGL1 1544 aa17.55■□□□□ 0.4
KCNMA1-227ENST00000638203 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
KCNMA1-227ENST00000638203 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
KCNMA1-227ENST00000638203 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
KCNMA1-227ENST00000638203 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
KCNMA1-227ENST00000638203 DAPK1P53355 1430 aa17.53■□□□□ 0.4
KCNMA1-227ENST00000638203 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
KCNMA1-227ENST00000638203 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
KCNMA1-227ENST00000638203 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
KCNMA1-227ENST00000638203 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
KCNMA1-227ENST00000638203 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
KCNMA1-227ENST00000638203 ARXQ96QS3 562 aa17.5■□□□□ 0.39
KCNMA1-227ENST00000638203 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
KCNMA1-227ENST00000638203 KDM6BO15054 1643 aa17.49■□□□□ 0.39
KCNMA1-227ENST00000638203 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
KCNMA1-227ENST00000638203 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
KCNMA1-227ENST00000638203 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
KCNMA1-227ENST00000638203 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-227ENST00000638203 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-227ENST00000638203 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-227ENST00000638203 ABCC5O15440 1437 aa17.47■□□□□ 0.39
KCNMA1-227ENST00000638203 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
KCNMA1-227ENST00000638203 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
KCNMA1-227ENST00000638203 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-227ENST00000638203 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
KCNMA1-227ENST00000638203 ADCY10Q96PN6 1610 aa17.44■□□□□ 0.38
KCNMA1-227ENST00000638203 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
KCNMA1-227ENST00000638203 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-227ENST00000638203 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
KCNMA1-227ENST00000638203 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
KCNMA1-227ENST00000638203 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
KCNMA1-227ENST00000638203 PKD2Q13563 968 aa17.41■□□□□ 0.38
KCNMA1-227ENST00000638203 MSH5O43196 834 aa17.41■□□□□ 0.38
KCNMA1-227ENST00000638203 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-227ENST00000638203 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-227ENST00000638203 CNTLNQ9NXG0 1405 aa17.41■□□□□ 0.38
KCNMA1-227ENST00000638203 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
KCNMA1-227ENST00000638203 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-227ENST00000638203 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
KCNMA1-227ENST00000638203 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
KCNMA1-227ENST00000638203 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
KCNMA1-227ENST00000638203 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-227ENST00000638203 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
KCNMA1-227ENST00000638203 ADGRL2O95490 1459 aa17.37■□□□□ 0.37
KCNMA1-227ENST00000638203 CROCC2H7BZ55 1655 aa17.37■□□□□ 0.37
KCNMA1-227ENST00000638203 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
KCNMA1-227ENST00000638203 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-227ENST00000638203 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-227ENST00000638203 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
KCNMA1-227ENST00000638203 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-227ENST00000638203 PLIN1O60240 522 aa17.35■□□□□ 0.37
KCNMA1-227ENST00000638203 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-227ENST00000638203 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
KCNMA1-227ENST00000638203 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
KCNMA1-227ENST00000638203 NUP160Q12769 1436 aa17.34■□□□□ 0.37
KCNMA1-227ENST00000638203 RGS3P49796 1198 aa17.33■□□□□ 0.36
KCNMA1-227ENST00000638203 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
KCNMA1-227ENST00000638203 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
KCNMA1-227ENST00000638203 PLB1Q6P1J6 1458 aa17.32■□□□□ 0.36
KCNMA1-227ENST00000638203 KIF14Q15058 1648 aa17.32■□□□□ 0.36
KCNMA1-227ENST00000638203 PZPP20742 1482 aa17.31■□□□□ 0.36
KCNMA1-227ENST00000638203 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
KCNMA1-227ENST00000638203 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-227ENST00000638203 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
KCNMA1-227ENST00000638203 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
KCNMA1-227ENST00000638203 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
KCNMA1-227ENST00000638203 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
KCNMA1-227ENST00000638203 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
KCNMA1-227ENST00000638203 SLC4A3P48751 1232 aa17.28■□□□□ 0.36
KCNMA1-227ENST00000638203 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
KCNMA1-227ENST00000638203 NEFMP07197 916 aa17.28■□□□□ 0.36
KCNMA1-227ENST00000638203 ABCA8O94911 1581 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms